Gene Amir_2746 details

Gene Information

• Locus tag: Amir_2746
• ID: 8326935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3161696
• End bp: 3162205
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644943284
• Product: putative GAF sensor protein
• Protein accession: YP_003100525
• Protein GI: 256376865
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2203] FOG: GAF domain

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTGC TCGTCCCCCT CGTGAACCTC GAACGGCTGA CGGAAGCCAC CCGCTACGAC 
ACCACCAGCC CCGCGCTGCG CGGGAAGCTG GACGTGCTGG TGAAGCGGGC CGCCGACCGG 
CTCGGCATGA AGATCGGCCT GGTGAACTTC GTCATGGACA CCACCACGCA CGCCATCGCC 
TCGTACGGCA CCGCCACCGG CATGATCGAG GCGGGCATCC CCGCGGAGTG GAGCTTCTGC 
TCCCGCGTGG TGCTCACCGG CTGCGACTAC ACGGTGACCG ACGCGACCGC CGACCCCTCG 
TGGCAGGACA CCCCGGCGGT GACCGTGATC GGCGCGCGCA GCTACGCGGG CGTGCCGCTG 
GTGGCCCCGA ACGGGCAGGT GGTCGGCGCC CACTGCGTGG TCGACACCAA GCGGCGCGAG 
TTCGACGCCG CCGAGCTGGC GCACCTGCGC GAGTCGGCGA AGGAGATCAT GCGGGTGATG 
CAGGACTACC GGAGCACCAA GGAGGGCTGA 

 

Protein sequence

MTLLVPLVNL ERLTEATRYD TTSPALRGKL DVLVKRAADR LGMKIGLVNF VMDTTTHAIA 
SYGTATGMIE AGIPAEWSFC SRVVLTGCDY TVTDATADPS WQDTPAVTVI GARSYAGVPL 
VAPNGQVVGA HCVVDTKRRE FDAAELAHLR ESAKEIMRVM QDYRSTKEG