| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2732 |
|---|
| Symbol | |
|---|
| ID | 8326921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3145138 |
|---|
| End bp | 3146154 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644943271 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003100512 |
|---|
| Protein GI | 256376852 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCACGCA CCCGCCCCAC CGCGCCGGCG CTGACCGCCG TCGCGCTGAG CGCCCTGCTC
CTGTCCTCCT GCGGGGCCTC CGTGCGCCCG CAGGCCGAAG CGCCGCAAGC ACTGGGCTAC
CCGGTCACCG TCACCAACTG CGGCCAGGAG CTCACCTTCG ACCGCGCCCC CGAGCGCGTC
GTCGCCTACG ACAGCGGCAT CGTGGAGACG ATGTTCGCGC TCGGCCTGAC CGACCGCCTC
GCCGGGTACG TCATGTCCGG CAGCAAGAAC AACGACATCG AGGGCTCGCC CTGGAAGGCC
GACTACGAGC GCGCCCCCAG GCTCGGCGTC GACCGGATCA GCAAGGAGTC GATCCTCCAG
GCCGGGGCCG ACTTCGTCTA CGCGGGCTGG AACTACGGCT TCAGCGAGGA CCGCGGCCTC
ACCCCGGCGC ACCTGGACGC GCTGGGCGTG CGGTCCTACG TGCTCAGCGA GTCCTGCCGC
AACGGCGTGG GCAGCACCTC GCGCGGGACG ATGGCCCCGC TGGACGCCCT GTACACCGAC
CTGCGCAACC TCGGGAAGGT CTTCGGCGTC TCCGAGCGGG CCGAGCAGCT GGTGACCGAG
TACCGGGAGG TCGTGCGGCA GGCCGAGGCG ACCGTCCCGG CGGATCGCCC GCGCCCCAAG
GTGTTCCTCT ACGACTCGGG GAACGACAAG CCGTTCACCG GCGGGAAGTA CGCCGCCTCC
AACGAGATCA TCACGCGCGG CGGCGGCGAG GACGTCATGT CCGGCGTGCT CGACAGCTGG
ACCACGGTCA CCTGGGAGAG CGTCGTCGAG GCGAACCCCG ACGTCATCGT GATCAACGAC
TACGACGTGC CCAGCGCCGA GGACAAGCGC AGGTTCCTGG AGACCTACCC GCCGCTCGCG
CAGGTCCCCG CCGTCAAGAA CGGCCGCTTC CTGGTGCTGC CGTACGCGGC GCTCGTGCAG
GGACCGCGCA ACCCGGCCGC GATCCGCACC GTCGCGGACT ACCTCAACGG CCTGTGA
|
|---|
| Protein sequence | MPRTRPTAPA LTAVALSALL LSSCGASVRP QAEAPQALGY PVTVTNCGQE LTFDRAPERV
VAYDSGIVET MFALGLTDRL AGYVMSGSKN NDIEGSPWKA DYERAPRLGV DRISKESILQ
AGADFVYAGW NYGFSEDRGL TPAHLDALGV RSYVLSESCR NGVGSTSRGT MAPLDALYTD
LRNLGKVFGV SERAEQLVTE YREVVRQAEA TVPADRPRPK VFLYDSGNDK PFTGGKYAAS
NEIITRGGGE DVMSGVLDSW TTVTWESVVE ANPDVIVIND YDVPSAEDKR RFLETYPPLA
QVPAVKNGRF LVLPYAALVQ GPRNPAAIRT VADYLNGL
|
|---|
| |