| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2718 |
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| Symbol | |
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| ID | 8326907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3119448 |
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| End bp | 3120851 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644943258 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003100499 |
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| Protein GI | 256376839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.815638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCCC CCGGTTCGCG CATCGACCGG CCGCTGCTGC GCACCGCGTT CGTGCTGGTG
CTGGGCACGT TCATGGCCAC CCTGGACGCG ACGATCGTCG CGGTCGGCGT CGACCGGCTC
TCCGAGGACT TCGGGGCCGG GGTCACCGAG GTGCAGTGGG TGACCACCGC CTACCTGCTG
GCGGTGGTCG CCTCGGTGCC CGCGTCCGGG TGGCTGGCCG ACCGGTTCGG CGGGCGGCGG
GTGTGGCTGG GCGCGCTCGG GGTGTTCCTG CTCGGGTCGG CGCTGTGCGC GGTGGCCTGG
TCGCTGCCGT CGCTGGTGGC GTTCCGGGTG GTGCAGGGCA TCGGCGGCGG GCTGCTGCCG
CCCACCGGTC AGGCGCTGCT GGCGCGCGTG GCCGGACCCG GCCGGATCGG GCGGTTGATC
AGCGTCGTCG GCGTGGTGCC GCTGCTGTCC CCCGTGCTGG GGCCGCTGAC GGGCGGGACG
CTGCTGGCCG TCGCGGACTG GCCGTGGCTG TTCCTGGTGA ACCTGCCGAT CGGCGTGGTG
GCGGCGGCGC TGGCGGTGCG GCACGTGCCG TCCGTTCCGC CGTCGGAGGC GCGCGCCCGG
TTCGACCTGG TGGGCGCGCT GCTGCTCGCG CCCGGCCTGG CGGTGCTGGT GCTGGGCCTG
ACCGGGGACG GCGGTCCGCC GGTGTCGGCG GCCGGCATCG GGCTCGGGGT GCTGGCGCTG
GTGGCGTTCA CCTGGCACGG CCTGCGGGCG CGGGACGTGC CGCCGCTGGT GGACCCGAGG
TTGTTCACCC GGCCGCCGTT CGGGGTCGCG GCGCTGGCGC TGCTGCTGCT GGGCGCGTCG
GTGTTCGGCA CGATGTTCCT GCTGCCGCTC TACCTGCAGG GCGGCGGCGG GCTCACCCCG
TGGCGGACCG GGCTCCTCCT GGCCCCGCAG GGGATCGGCG CCGCCGCCGG GTCGGTGCTG
GTGAGCCGGC TGGTGGACCG GACCGCGCCC AGGGTGCTGG TGCTGTGCGG CATCGGCCTG
GTCGCGCTCG GCACGGTCCC GTTCACGCAG CTGCACCACG CGCCGCCGGA CGCGCTGGTC
GCGGGCGCGC TGCTGCTGCG CGGGGTCGGC GCGGCGCTGG TGAGCGCGCC GGTGCTGGCC
ACGGTGTACC GGAGCCTGCC GCCCGGCGGG CTGCCCAGGG CCGCGGGCGC GCTGAACCTG
CTCAACACCG TCGGCGGCTC GCTCGGCACC GCGCTGCTCG CGGTGCTGCT CGGCGGGCGG
CTGGCGGCGC GCGGCCCCGA CGTGGCCGCC GCCTACGCCG ACACCTTCTG GTGGGTGCTC
GCGCTGGTGC TCGTCGCGGC GGCCGGGGCG ACCCGGCTGC CCGCCTCCCC TCCCGTCTCC
CCGAAGGACC CCAAGGATGA CTGA
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| Protein sequence | MTAPGSRIDR PLLRTAFVLV LGTFMATLDA TIVAVGVDRL SEDFGAGVTE VQWVTTAYLL
AVVASVPASG WLADRFGGRR VWLGALGVFL LGSALCAVAW SLPSLVAFRV VQGIGGGLLP
PTGQALLARV AGPGRIGRLI SVVGVVPLLS PVLGPLTGGT LLAVADWPWL FLVNLPIGVV
AAALAVRHVP SVPPSEARAR FDLVGALLLA PGLAVLVLGL TGDGGPPVSA AGIGLGVLAL
VAFTWHGLRA RDVPPLVDPR LFTRPPFGVA ALALLLLGAS VFGTMFLLPL YLQGGGGLTP
WRTGLLLAPQ GIGAAAGSVL VSRLVDRTAP RVLVLCGIGL VALGTVPFTQ LHHAPPDALV
AGALLLRGVG AALVSAPVLA TVYRSLPPGG LPRAAGALNL LNTVGGSLGT ALLAVLLGGR
LAARGPDVAA AYADTFWWVL ALVLVAAAGA TRLPASPPVS PKDPKDD
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