Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2716 |
Symbol | |
ID | 8326905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3114940 |
End bp | 3117765 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644943256 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003100497 |
Protein GI | 256376837 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000419619 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGACGT CCCGGAGGAG GAGTGGAGTG ATCGAGCGGG ACCACGAGCT GGGGCTGCTG CGCGCGCTGC TCGCGGACGC GGTCGACGGG CGCGGCGGCG CCGCCGTGGT GACCGGGCCG GTGGCCACCG GGAAGACCGA GCTGCTGACC GCGTTCGCCG GGCACGCCGT CGAGGCGGGC GCGGTCGTGC TCGGCTCGGT GTCCTCGCGC GGCGAGCGCG GCATCCCGTT CGCCGCGCTC GGGCAGGCGC TCCAGCGGCC CTCGGCCATG TCGTCCCGGT TCCCCGAGGT CCTGCGGCTG CTGGACGAGG CGGGGTGGCC CGCGGGGGCG CGGGCGGCGC GGGAGCCGCT GCCGCAGGTG GGGCCGCTGA TCTCGCGGAC GCTGTGGCGC GCGGTGCTGG AGGTCACCGC CGGGCGCCCG CTCGTGCTGA TCGCCGACGA CGCCGACCTC GCCGACGAGC ACTCGCTGCG CTGCCTGTCG TTCGTGGCCC GCCGGGCGCG CGGGGCGCGG GTGGCCGTGG TGCTGGCCGC GCAGACCGGG ACCCGGCGCG CCAACCCGTT CCTGCTCGGC GAGGTGCACC GGCAGCCGCT GTGGCGGCAG GTCCGGCTCG CGCCGCTGAG CGCGGGCGCG GTGGCGGAGG CGGTGGCGCG GCGGTTCGGG GCCGCGGCCG GGTCCGCCGC CGGGTGGCAC GCGGTGAGCG GCGGGAACCC GTTGCTGCTC AAGGCGCTGC TGGAGGACGG GGTGGCGCGG GACGGGGGTG GGCCCGCGCC GGGCGAGGCG TTCGCGGAGG CGGTGGGGGC GGTGCTGCAC CGGTGCGACC CGGAGCTCGC GGACGTGGCG GTGGCGTGCG CCGTGCTGGA CCGGCCCGCG GAGCCCGAGC AGGTGGCCGA CCTGCTGGGC GTGCCGCCGG AGTCGGTGCT GGTGCGCACC AGGGCGCTGG ACTCGGCCGG GGTGACGGTG GGCGGGCGGT TGCCGCACGC CGCCGCGCGC GCGGCGGTGC TCGCCCCGCT CCCGGCCGGG GAGCGGGCCG CGCTGCGCCT GCGGGCGGCC CGGCGGCTGT ACTACGGCGG CGCGGCGCCC GACGCGGTGG CGGACCTGCT GCTGGCGGGC GGGGACGCGC TGCCGGGGTG GAGCGCGTCG CTGCTGCTGG AGGCCGGGAC CGCGGCGCTG CGGGACGACC GGGTCGAGCG GGCGGTCGCG TACCTGGAGC TGGGGGCGCG GGTGGCGACG GGCGCGCGGG AACGGGTCGC GGTGCTGAGC CTGCTGGTCT CGGCGCACCT GCGCGGCGGT GGGGCGGGGT GCGCGCGGCA CGTGGACCGG CTGCTGGAGG CCGCGGCGGA GGGCGGGTTC CCCGGACCGC TGGCCCCGGT GGTGTGCCAC CTGGTGCGGG CGGGCCGGTT GGACGACGCG GCCACGCTGC TCGGGCGGCT CGCGCCCCCC GGCGGGCGGG TGCCGCTGCG GTTGCGGGTG GAGCTGCCGT TCCTGCGGAC CTGGCTGGCG TACCACGCGC CGGGGCTGCC CGCGCGCGGC CCGGAGCTGC TGGACGACGA CGACGCGGAG TACCTGCTGC GCGAGGCCGG GATGTCGCCG CAGGCGCAGG CGGTGCGGGT GCTGGAGATC GCGCTGGCGG GCGGGGACCC GGAGGAGGCG GTCGAGCACG CCGAGCACGT GCTGCACGGG TGCGCGCTGA CCGACCGGAA CGCCGAGGTG CTGTTCAGCG TGCTGACCGC GCTGGTGGAC CTGGACCGGT GGCGGGAGGC GCTGCCGTGG TGCGAGGCGC TGCTGGCCGA GGCGGGGGCG CGGGACGCGG GGGCGTGGAC GGCGGTGCTG CTGGGGGTGC GGGCGGACAT CGCGCTGCGG GCCTCGGAGT ACGGGGCGGC GATCGAGCAC GCGCGGCGGG CGCTGGCGGG GGTGCGCGCC GAGTCGTGGG GCGCGATGGC GGGACGGCCG CTGGCGACGC TGCTGCACGC GGGCACGGCG TCCGGGCGGT GCGGGGTGGA GCTGCCCCGG CGGCAGGTGC CGGAGGTGAC GTTCCGGACC ACGGCCGGGT TGCGGTACTG GCTGGCCAAG GGCTGGCAGG ACCTGGCGGC GGGCCGGTTG CACGCGGCGG CCACCGCGTT CCGGGCGTGC GGGGAGCTGG CGGTGGCGTG GGGGGTGGAC GCGGTGGGGT TGCTGCCGTG GCGGACCGGG GTGGCGCAGG TGCTGCTGCG GCGCGGGAAG ACCGGGCAGG CGCGGGCGGT GCTGGAGGAG CAGCTCGCGC GGGCGCACCG GGGTGACGGG CGGGTGCGGG GGGTGACGCT GCGGCTGCTG GCGCAGACGG TGGGACCGGC GGAGCGGCCG GGGTTGCTGC GGGAGGCGGT GGAGGTGCTG GAGCGGTGCG GGGCGGTGGT GGAGCAGGCG CACGCGCTGG CGGACCTCGG GCAGGCGCTG CACCGGCTCG GGGACTTCGA CCGGGGGCGG GTGGCGGTGC GGCGGGCGTG GTCGTTGGCG GAGCGGTTCG GGGTGGGGTT GCCGGGTGAG CGGCCGGGGC AGGGCGGGCG GGACGCGCGG GAGGGTGGGC GGGAGGGTGG GCGGGAGGGG TTGGTGGAGC GGCGGGCGGT GGAGGTCAGG CGGTTGAGCG AGGCGGAGCG GCGGGTGGCG GAGCTGGCGG CTCGGGGGGA CAAGAACCAG GAGATCGCGC GGAAGCTGTT CATCACGGTG AGCACGGTGG AGCAGCACTT GACGCGGGTG TACCGGAAGC TGCGGGTGAC CCGGCGGACG GATCTGCCGG GGGTGCTGGA CCTGCTGGAG GTGGACGGCG CGTTGAGCGG GGTGGTGTCC GGGTGA
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Protein sequence | MATSRRRSGV IERDHELGLL RALLADAVDG RGGAAVVTGP VATGKTELLT AFAGHAVEAG AVVLGSVSSR GERGIPFAAL GQALQRPSAM SSRFPEVLRL LDEAGWPAGA RAAREPLPQV GPLISRTLWR AVLEVTAGRP LVLIADDADL ADEHSLRCLS FVARRARGAR VAVVLAAQTG TRRANPFLLG EVHRQPLWRQ VRLAPLSAGA VAEAVARRFG AAAGSAAGWH AVSGGNPLLL KALLEDGVAR DGGGPAPGEA FAEAVGAVLH RCDPELADVA VACAVLDRPA EPEQVADLLG VPPESVLVRT RALDSAGVTV GGRLPHAAAR AAVLAPLPAG ERAALRLRAA RRLYYGGAAP DAVADLLLAG GDALPGWSAS LLLEAGTAAL RDDRVERAVA YLELGARVAT GARERVAVLS LLVSAHLRGG GAGCARHVDR LLEAAAEGGF PGPLAPVVCH LVRAGRLDDA ATLLGRLAPP GGRVPLRLRV ELPFLRTWLA YHAPGLPARG PELLDDDDAE YLLREAGMSP QAQAVRVLEI ALAGGDPEEA VEHAEHVLHG CALTDRNAEV LFSVLTALVD LDRWREALPW CEALLAEAGA RDAGAWTAVL LGVRADIALR ASEYGAAIEH ARRALAGVRA ESWGAMAGRP LATLLHAGTA SGRCGVELPR RQVPEVTFRT TAGLRYWLAK GWQDLAAGRL HAAATAFRAC GELAVAWGVD AVGLLPWRTG VAQVLLRRGK TGQARAVLEE QLARAHRGDG RVRGVTLRLL AQTVGPAERP GLLREAVEVL ERCGAVVEQA HALADLGQAL HRLGDFDRGR VAVRRAWSLA ERFGVGLPGE RPGQGGRDAR EGGREGGREG LVERRAVEVR RLSEAERRVA ELAARGDKNQ EIARKLFITV STVEQHLTRV YRKLRVTRRT DLPGVLDLLE VDGALSGVVS G
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