Gene Amir_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2716 
Symbol 
ID8326905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3114940 
End bp3117765 
Gene Length2826 bp 
Protein Length941 aa 
Translation table11 
GC content79% 
IMG OID644943256 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003100497 
Protein GI256376837 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000419619 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGACGT CCCGGAGGAG GAGTGGAGTG ATCGAGCGGG ACCACGAGCT GGGGCTGCTG 
CGCGCGCTGC TCGCGGACGC GGTCGACGGG CGCGGCGGCG CCGCCGTGGT GACCGGGCCG
GTGGCCACCG GGAAGACCGA GCTGCTGACC GCGTTCGCCG GGCACGCCGT CGAGGCGGGC
GCGGTCGTGC TCGGCTCGGT GTCCTCGCGC GGCGAGCGCG GCATCCCGTT CGCCGCGCTC
GGGCAGGCGC TCCAGCGGCC CTCGGCCATG TCGTCCCGGT TCCCCGAGGT CCTGCGGCTG
CTGGACGAGG CGGGGTGGCC CGCGGGGGCG CGGGCGGCGC GGGAGCCGCT GCCGCAGGTG
GGGCCGCTGA TCTCGCGGAC GCTGTGGCGC GCGGTGCTGG AGGTCACCGC CGGGCGCCCG
CTCGTGCTGA TCGCCGACGA CGCCGACCTC GCCGACGAGC ACTCGCTGCG CTGCCTGTCG
TTCGTGGCCC GCCGGGCGCG CGGGGCGCGG GTGGCCGTGG TGCTGGCCGC GCAGACCGGG
ACCCGGCGCG CCAACCCGTT CCTGCTCGGC GAGGTGCACC GGCAGCCGCT GTGGCGGCAG
GTCCGGCTCG CGCCGCTGAG CGCGGGCGCG GTGGCGGAGG CGGTGGCGCG GCGGTTCGGG
GCCGCGGCCG GGTCCGCCGC CGGGTGGCAC GCGGTGAGCG GCGGGAACCC GTTGCTGCTC
AAGGCGCTGC TGGAGGACGG GGTGGCGCGG GACGGGGGTG GGCCCGCGCC GGGCGAGGCG
TTCGCGGAGG CGGTGGGGGC GGTGCTGCAC CGGTGCGACC CGGAGCTCGC GGACGTGGCG
GTGGCGTGCG CCGTGCTGGA CCGGCCCGCG GAGCCCGAGC AGGTGGCCGA CCTGCTGGGC
GTGCCGCCGG AGTCGGTGCT GGTGCGCACC AGGGCGCTGG ACTCGGCCGG GGTGACGGTG
GGCGGGCGGT TGCCGCACGC CGCCGCGCGC GCGGCGGTGC TCGCCCCGCT CCCGGCCGGG
GAGCGGGCCG CGCTGCGCCT GCGGGCGGCC CGGCGGCTGT ACTACGGCGG CGCGGCGCCC
GACGCGGTGG CGGACCTGCT GCTGGCGGGC GGGGACGCGC TGCCGGGGTG GAGCGCGTCG
CTGCTGCTGG AGGCCGGGAC CGCGGCGCTG CGGGACGACC GGGTCGAGCG GGCGGTCGCG
TACCTGGAGC TGGGGGCGCG GGTGGCGACG GGCGCGCGGG AACGGGTCGC GGTGCTGAGC
CTGCTGGTCT CGGCGCACCT GCGCGGCGGT GGGGCGGGGT GCGCGCGGCA CGTGGACCGG
CTGCTGGAGG CCGCGGCGGA GGGCGGGTTC CCCGGACCGC TGGCCCCGGT GGTGTGCCAC
CTGGTGCGGG CGGGCCGGTT GGACGACGCG GCCACGCTGC TCGGGCGGCT CGCGCCCCCC
GGCGGGCGGG TGCCGCTGCG GTTGCGGGTG GAGCTGCCGT TCCTGCGGAC CTGGCTGGCG
TACCACGCGC CGGGGCTGCC CGCGCGCGGC CCGGAGCTGC TGGACGACGA CGACGCGGAG
TACCTGCTGC GCGAGGCCGG GATGTCGCCG CAGGCGCAGG CGGTGCGGGT GCTGGAGATC
GCGCTGGCGG GCGGGGACCC GGAGGAGGCG GTCGAGCACG CCGAGCACGT GCTGCACGGG
TGCGCGCTGA CCGACCGGAA CGCCGAGGTG CTGTTCAGCG TGCTGACCGC GCTGGTGGAC
CTGGACCGGT GGCGGGAGGC GCTGCCGTGG TGCGAGGCGC TGCTGGCCGA GGCGGGGGCG
CGGGACGCGG GGGCGTGGAC GGCGGTGCTG CTGGGGGTGC GGGCGGACAT CGCGCTGCGG
GCCTCGGAGT ACGGGGCGGC GATCGAGCAC GCGCGGCGGG CGCTGGCGGG GGTGCGCGCC
GAGTCGTGGG GCGCGATGGC GGGACGGCCG CTGGCGACGC TGCTGCACGC GGGCACGGCG
TCCGGGCGGT GCGGGGTGGA GCTGCCCCGG CGGCAGGTGC CGGAGGTGAC GTTCCGGACC
ACGGCCGGGT TGCGGTACTG GCTGGCCAAG GGCTGGCAGG ACCTGGCGGC GGGCCGGTTG
CACGCGGCGG CCACCGCGTT CCGGGCGTGC GGGGAGCTGG CGGTGGCGTG GGGGGTGGAC
GCGGTGGGGT TGCTGCCGTG GCGGACCGGG GTGGCGCAGG TGCTGCTGCG GCGCGGGAAG
ACCGGGCAGG CGCGGGCGGT GCTGGAGGAG CAGCTCGCGC GGGCGCACCG GGGTGACGGG
CGGGTGCGGG GGGTGACGCT GCGGCTGCTG GCGCAGACGG TGGGACCGGC GGAGCGGCCG
GGGTTGCTGC GGGAGGCGGT GGAGGTGCTG GAGCGGTGCG GGGCGGTGGT GGAGCAGGCG
CACGCGCTGG CGGACCTCGG GCAGGCGCTG CACCGGCTCG GGGACTTCGA CCGGGGGCGG
GTGGCGGTGC GGCGGGCGTG GTCGTTGGCG GAGCGGTTCG GGGTGGGGTT GCCGGGTGAG
CGGCCGGGGC AGGGCGGGCG GGACGCGCGG GAGGGTGGGC GGGAGGGTGG GCGGGAGGGG
TTGGTGGAGC GGCGGGCGGT GGAGGTCAGG CGGTTGAGCG AGGCGGAGCG GCGGGTGGCG
GAGCTGGCGG CTCGGGGGGA CAAGAACCAG GAGATCGCGC GGAAGCTGTT CATCACGGTG
AGCACGGTGG AGCAGCACTT GACGCGGGTG TACCGGAAGC TGCGGGTGAC CCGGCGGACG
GATCTGCCGG GGGTGCTGGA CCTGCTGGAG GTGGACGGCG CGTTGAGCGG GGTGGTGTCC
GGGTGA
 
Protein sequence
MATSRRRSGV IERDHELGLL RALLADAVDG RGGAAVVTGP VATGKTELLT AFAGHAVEAG 
AVVLGSVSSR GERGIPFAAL GQALQRPSAM SSRFPEVLRL LDEAGWPAGA RAAREPLPQV
GPLISRTLWR AVLEVTAGRP LVLIADDADL ADEHSLRCLS FVARRARGAR VAVVLAAQTG
TRRANPFLLG EVHRQPLWRQ VRLAPLSAGA VAEAVARRFG AAAGSAAGWH AVSGGNPLLL
KALLEDGVAR DGGGPAPGEA FAEAVGAVLH RCDPELADVA VACAVLDRPA EPEQVADLLG
VPPESVLVRT RALDSAGVTV GGRLPHAAAR AAVLAPLPAG ERAALRLRAA RRLYYGGAAP
DAVADLLLAG GDALPGWSAS LLLEAGTAAL RDDRVERAVA YLELGARVAT GARERVAVLS
LLVSAHLRGG GAGCARHVDR LLEAAAEGGF PGPLAPVVCH LVRAGRLDDA ATLLGRLAPP
GGRVPLRLRV ELPFLRTWLA YHAPGLPARG PELLDDDDAE YLLREAGMSP QAQAVRVLEI
ALAGGDPEEA VEHAEHVLHG CALTDRNAEV LFSVLTALVD LDRWREALPW CEALLAEAGA
RDAGAWTAVL LGVRADIALR ASEYGAAIEH ARRALAGVRA ESWGAMAGRP LATLLHAGTA
SGRCGVELPR RQVPEVTFRT TAGLRYWLAK GWQDLAAGRL HAAATAFRAC GELAVAWGVD
AVGLLPWRTG VAQVLLRRGK TGQARAVLEE QLARAHRGDG RVRGVTLRLL AQTVGPAERP
GLLREAVEVL ERCGAVVEQA HALADLGQAL HRLGDFDRGR VAVRRAWSLA ERFGVGLPGE
RPGQGGRDAR EGGREGGREG LVERRAVEVR RLSEAERRVA ELAARGDKNQ EIARKLFITV
STVEQHLTRV YRKLRVTRRT DLPGVLDLLE VDGALSGVVS G