Gene Amir_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2707 
Symbol 
ID8326896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3106565 
End bp3107587 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content76% 
IMG OID644943247 
Producttransport system permease protein 
Protein accessionYP_003100488 
Protein GI256376828 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGC GCCGCGCGCC GCTGTGGCTC GCGGTCGTCG GCGGGCTGGC GCTGCTGCTG 
GTGTCCGTCG CGCTCGCGGT CACGTTCGGA CCGGCGGGCA TCGGCGTCTC CGACGTCTGG
ACGACCGTGC TCGCCCACCT CGGCTGGGGC AGCTCCTCGC TGTCGCCGCT GCGCGACGGC
ATCGTGTGGC ACCTGCGCGT GCCCAGGACC CTGCTCGCCG CGGTCTGCGG GGCCGGGCTC
GCGGTGTGCG GCGTGGTGCT CCAGTCGCTG CTGCGCAACC CGCTGGCCGA CCCGTTCGTG
CTCGGGGTGT CCTCGGGCGC GTCGACCGGG GCCGTGGTCG TGGTGGTGCT CGGCATCGGC
GGTGGCGCGG TGACGCTGTC CGCCGGGGCG TTCGTGGGCG CGGTGTGCTC GTTCGCGCTG
GTGCTGCTGC TCAGCCAGGC GCTCGGCGGG CGGGTGGACC GGGTCGTGCT GTGCGGGGTC
GCGGCGATGC AGCTGTTCTC GGCGCTGACC TCGTTCATCG TGCTCACCGC CGCCGACGCC
GAGACCACCA AGGGCGTGCT GTTCTGGCTG CTCGGGTCGC TGGCCGGGGC CTCGTGGACC
GACGTCGCGG TGTGCGCGGT GGTGCTGGCG TTCTCGCTGG TGGTGTGCGT CGGGCACGGG
CGGGCGCTGG ACGCGTTCGC GTTCGGCGAG GACGCCGCCG CCGCGCTCGG GGTCCGGGTC
GGGCGCACCA GGGTGGTGCT GCTGTGCGTG ACCGCGCTGC TGACCGCCGC GCTGGTGAGC
GTGGCGGGCG CGGTCGGGTT CGTCGGCCTG GTGCTGCCGC ACGCGACGCG CGCGATCATC
GGCTCCGCGC ACACCCGGCT GCTGCCGGTG ACGGCGCTGA CCGGCGCGGT GTTCCTGGTG
TGGGTGGACA CGGCGGCGCG GACCGTGCTG GAGCCGCAGG AGGTGCCGGT GGGGGTGCTG
ACCTCGCTGA TCGGGGTGCC CGCGTTCATC GTGGTGCTGG CGCGCGCGGG GAGGGTGTCG
TGA
 
Protein sequence
MTARRAPLWL AVVGGLALLL VSVALAVTFG PAGIGVSDVW TTVLAHLGWG SSSLSPLRDG 
IVWHLRVPRT LLAAVCGAGL AVCGVVLQSL LRNPLADPFV LGVSSGASTG AVVVVVLGIG
GGAVTLSAGA FVGAVCSFAL VLLLSQALGG RVDRVVLCGV AAMQLFSALT SFIVLTAADA
ETTKGVLFWL LGSLAGASWT DVAVCAVVLA FSLVVCVGHG RALDAFAFGE DAAAALGVRV
GRTRVVLLCV TALLTAALVS VAGAVGFVGL VLPHATRAII GSAHTRLLPV TALTGAVFLV
WVDTAARTVL EPQEVPVGVL TSLIGVPAFI VVLARAGRVS