| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2706 |
|---|
| Symbol | |
|---|
| ID | 8326895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3105498 |
|---|
| End bp | 3106568 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943246 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003100487 |
|---|
| Protein GI | 256376827 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.51364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCCAG CACGCCCCGC CACACCCCCG CGCCCCACCA CCCGGCGCCT CAAGCCCCTG
CGCTCGACCG CCCTGCTCGT CGCGCTCGCC GCCGCGACCG CCACCGCCTG CTCCTCGGCC
CCCGCGCAGG ACGCCCCCGC CGCCGCCGAC ACCGCCGTCA CCCTGGACAA CTGCGGCCGG
AAGATCACCG TCGCCGAGCC CCCGAAGCGC GCCGTCGCGC TCAACCAGGG CAGCGCCGAG
ATCATGTACG CCCTCGGCCT CCAGGACCGC ATGGTCGGCA CCGCCACCTG GACCGACCCG
GTCCTGCCCG AGTACGCCGC CGCGAACGAG AAGGTCCCGC GCCTGGCCGA CAACGCGCCC
TCGTTCGAGC GCGTCCTGGA GGCCGAGCCC GACTTCGTCG CCGCCTCCTT CGAGTCCGTC
CTCGGCACCG GCGGCGTCGC CACCCGCGAC CAGTTCGAGC AGCTCGGCGT CCCCACCTAC
CTCTCGCCCA CCGACTGCGG CGCCAAGGAC AACAGCGGCG ACGGCGACGG CGTCCGCACC
ACCCCGCTGA CCATGGACGA CGTCTACGGC GAGATCCGCG ACCTCGCGAA GGTCTTCGGC
GTCGCGCAGC GCGGCGACGA CCTGGTCGCC TCGCTCCAGC AGCGCATGAG CGCCGCCACC
GACGGCCTCA AGGCCGAGGG CGTCGACCTG ATGTTCTGGT TCGCCAACTC CGAGGCCCCC
TACATGGGCG GCTGCTGCGG CGCGCCCGGC GTGGTCGTCA AGGCCCTCGG CGCGGGCAAC
TCGTTCCAGG ACACCCGCGA GGAGTGGCCC CAGATCAACT GGGAGGCCGT CGCCGAGCGC
GACCCGGACG TGCTCGTCAT CGGCGACCTC ACCCGCCGCT CGCAGACCGC CGAGACCGGC
GCCGCCAAGA TCGCGTTCCT GGAGTCGAAC CCGGTCACGG CGCAGATGAC GGCCGTCAAG
GAGAAGCGGT ACGTCCTGCT CACCGGCCAG GCCATGAACC CGACCATGCG CACCGTCGGC
GCCGTGGAGA CCGTGGCCCA GGCCCTGCGC CGCTTCGGGC TCGGCGGGTG A
|
|---|
| Protein sequence | MRPARPATPP RPTTRRLKPL RSTALLVALA AATATACSSA PAQDAPAAAD TAVTLDNCGR
KITVAEPPKR AVALNQGSAE IMYALGLQDR MVGTATWTDP VLPEYAAANE KVPRLADNAP
SFERVLEAEP DFVAASFESV LGTGGVATRD QFEQLGVPTY LSPTDCGAKD NSGDGDGVRT
TPLTMDDVYG EIRDLAKVFG VAQRGDDLVA SLQQRMSAAT DGLKAEGVDL MFWFANSEAP
YMGGCCGAPG VVVKALGAGN SFQDTREEWP QINWEAVAER DPDVLVIGDL TRRSQTAETG
AAKIAFLESN PVTAQMTAVK EKRYVLLTGQ AMNPTMRTVG AVETVAQALR RFGLGG
|
|---|
| |