Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2696 |
Symbol | |
ID | 8326885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3090196 |
End bp | 3092991 |
Gene Length | 2796 bp |
Protein Length | 931 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644943236 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003100477 |
Protein GI | 256376817 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.704955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTCG TTGAGAGCGA GCACCTGCTG GATCGAGCCC TCGCGCTGTT AGCCGAGAGC GCTCGCGGCC GGGGGCAGGT CGTGCACATC AGCGGCCCCG GCGCCAGCGG CAAGACCACC CTGCTCCGGG CGTTCGCCGA CCGCGCCCCC GACGACCCGC TGCTGCTGAG CGCCACCTGC TCGCGCGCCG AGCGCACCCT GCGCGGCGGC GTGCTCGCCC AGCTCGCCGC GGGCCTGCCC GACGGCCAGT CCGAGCGCTC CCTGCGGCTC GACCTCGACC AGCCCGACGG CCCGTCCGCG CAGGACTCCC CGCAGGCGAT CCGCGAGGCG TGCGAACAAC TCCTGGAGAT CGCCCGCCGC CGCCCCGTCG CCATCACCGT GGACGACGTC GAGCACGCCG ACCTGCTCAG CCTCCAGGCG CTGCTGTACC TGCTGCGCCG GATCGACACC GCGCGAATGA TCGTCGTGCT CACCGAGTCC GACCACTCGC GCCGCGTCAA CGCCCTGTTC CGCGCCGAGC TCACCCGCAT GTCCCGCTTC ACCGGGATGC GCCTGTCCCC GCTGTCCCCG CGCGGCGTCG CCCAGGTCAT CACCAGGGAG CTGGACCCGG CCACCGCCGC CACCGCCTCC GCCCTCACCG TGCACGCCGT CAGCGGCGGG AACCCGCTGC TGGTCAAGGC GCTGCTCCAG GACCACCGCG CGGCCTCCCT CGGCGGGGCC GAGCACACCG CCGACGACGC CGTCGTCATC GGCGAGGCGT TCCGCAGGGC CGTCCTGGCC TGCCTGCACC GCTGGGACCC CGAGCTGCTG GAGGTCGTGC GCGCCGTCGC CGTCCTCGGC GAGAACGCCA CCCCCGAGCT GCTCTGCCGC TTCCCCGAGC TCACCACCGC CGCCACCGAG GCCGTCACCT CCCTCAACAG CTCGGGCCTG CTCGACGACG GCCGCTTCCG GCACCCCGCC GTGCGCGCCG CCGTCCTCGG CGACATCGGC GCCGACGAGC TGACCGAGCT GCACCAGCGC GCCGCCGAGC TGCTCTACGT GGAGGGCCTG CCCAGCGGCG ACATCGCCAC CCACCTGGTC GCCGCGGGCG CGGCCACCGC CCCCTGGTCG GTGTCCGTGC TCCGCGACGC CGCCGACAGC GCCCTGGTCG AGCAGCGGCT CGACCACGCC GCCGACTGCC TCAAGCTGGC CCGCGCCGCC TGCCCCGCCG ACGACGAGCC GGGCCAGGCC GCCCTGCTCG CCGCGCTCGC CGCCGTCCAG TGGCGAACAA CGCCGTCCGT GGTCGCCAGG CACCTGCCCG CGCTCGCCGA GGCCGCCGAG CGCGGCCACC TCGACCCGCG CGACACCGGC GCCCTGCTGC GCTACCAGCT CTGGCACGGC CGCCGCGCCG AGGCCGGGAC CACCCTGCGC CGCATGGAGG AGGCCGCCGC CAGGCCCGGC AGCCCCGTCC TGGCCGAGCA CCGCGTGCTG CGCGACTGGG TCCGCTGGCA GCACCCGACC GTGGCCGCCG CCGCCCGCCC CGCCACCGGG GACCGCCGCT CCGCGCTCGC CCGCGACCAC CAGGAGGACC TCCTGGCCGC CGCCGAGTGG GTCCTGCGCA ACCGGTGGAT GCCCGACAGC GCCCCGGAAC TGGTCGTGCA CGCCCTCATG ACGCTCGCCG CGTGCGGGGC CCTCGCCCGC GCGAAGCACT GGCACGACGC GCTGCGCGAG GAGCTGGGCA CCGGCCAGAA CACCACCTGG AAGGCCACCC TCGCCGACGC CCGCGCCCAC ATCGCCCTGC TGGAGGGCGA CCTGGCGGGC GCCGAGCGCC AGGCCCGCCT CGCCCTGGCC ACCCTGTCCC CGCGCAACTG GGGCCAGGCC ATCGCCTCCC CGCTCGCCGC GCTCGTGCTC GCCACCTCCA CGGCGGGCAA GCACGACGAG GCCGAGTCCC AGCTCAAGCG CAGCGTCCCG GTGACCGTGC GCGACACCTG GCACTGGGCG GTGTACCTGC GCGCCAGGGG CCACGCCCAC CTGGCCGCCG GTCGCCCGCA CGCCGCGCTC GCCGACTTCG AGGAGTGCGG CGAGCTGGCC GTGCACTGGG ACCTGGACCT GCCCGCGCTG CTGCCGTGGC GCTCGGACGT CGTCCTCGCC CAGTTCGCCC TGGGCCGGGG AGACCGCGCC GCCGAGCTGG TCCTCGCCCA GCTCGACCGC CCCACCGCCG ACCTGCCGAG GGTGCGCGGC GCCTCGCTGC GCGCCCTGTC CCGCTCGGCG GAGCTCAAGC AGAGACTGCC CATGCTGCGC GAGTCCGTAG CCCTGCTGCA GGGCTGCGGC GACCAGGTGG AGCTCTCCCT CGCCCTGGCC GCCCTGGGCT CGACCCACCA CGCCCTGGGC GAGTTCGGCG CCGCCGAGGT CGTCGCCAAG CGCGCCGTCC GCACCGCGGA GGCCTGCGGC GCGGGCGCCC TGTGCCGCGC AGCCCTGCCC GCAGGACTGG TCCTGGACGG CACGCCCACC ACCCCCGAGA CCGAGACCAC CGCCGAGACC GCTCCCGCGG CCGAACCCGA CGACCTCGCC ACCCTCAGCA CCGCCGAGCG CAGGGTCGCC GCGCTGGCGG CCATGGGCCA CACCAACCGC GAGATCGGCC GCAAGCTCTA CATCACCATC AGCACCGTCG AGCAGCACCT GACCAGGGTC TACCGCAAGC TGAAGGTCCG CCGCCGCGCC GACCTGCCCA CCGGCCTGCC GCTGGAAGCG CTCTCCGCCT GGGGCGCCGA GACGGCGGTG GGCGCGGCCA GACCAGGCGC GTCACACCGC GCGTGA
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Protein sequence | MSLVESEHLL DRALALLAES ARGRGQVVHI SGPGASGKTT LLRAFADRAP DDPLLLSATC SRAERTLRGG VLAQLAAGLP DGQSERSLRL DLDQPDGPSA QDSPQAIREA CEQLLEIARR RPVAITVDDV EHADLLSLQA LLYLLRRIDT ARMIVVLTES DHSRRVNALF RAELTRMSRF TGMRLSPLSP RGVAQVITRE LDPATAATAS ALTVHAVSGG NPLLVKALLQ DHRAASLGGA EHTADDAVVI GEAFRRAVLA CLHRWDPELL EVVRAVAVLG ENATPELLCR FPELTTAATE AVTSLNSSGL LDDGRFRHPA VRAAVLGDIG ADELTELHQR AAELLYVEGL PSGDIATHLV AAGAATAPWS VSVLRDAADS ALVEQRLDHA ADCLKLARAA CPADDEPGQA ALLAALAAVQ WRTTPSVVAR HLPALAEAAE RGHLDPRDTG ALLRYQLWHG RRAEAGTTLR RMEEAAARPG SPVLAEHRVL RDWVRWQHPT VAAAARPATG DRRSALARDH QEDLLAAAEW VLRNRWMPDS APELVVHALM TLAACGALAR AKHWHDALRE ELGTGQNTTW KATLADARAH IALLEGDLAG AERQARLALA TLSPRNWGQA IASPLAALVL ATSTAGKHDE AESQLKRSVP VTVRDTWHWA VYLRARGHAH LAAGRPHAAL ADFEECGELA VHWDLDLPAL LPWRSDVVLA QFALGRGDRA AELVLAQLDR PTADLPRVRG ASLRALSRSA ELKQRLPMLR ESVALLQGCG DQVELSLALA ALGSTHHALG EFGAAEVVAK RAVRTAEACG AGALCRAALP AGLVLDGTPT TPETETTAET APAAEPDDLA TLSTAERRVA ALAAMGHTNR EIGRKLYITI STVEQHLTRV YRKLKVRRRA DLPTGLPLEA LSAWGAETAV GAARPGASHR A
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