Gene Amir_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2696 
Symbol 
ID8326885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3090196 
End bp3092991 
Gene Length2796 bp 
Protein Length931 aa 
Translation table11 
GC content77% 
IMG OID644943236 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003100477 
Protein GI256376817 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.704955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCG TTGAGAGCGA GCACCTGCTG GATCGAGCCC TCGCGCTGTT AGCCGAGAGC 
GCTCGCGGCC GGGGGCAGGT CGTGCACATC AGCGGCCCCG GCGCCAGCGG CAAGACCACC
CTGCTCCGGG CGTTCGCCGA CCGCGCCCCC GACGACCCGC TGCTGCTGAG CGCCACCTGC
TCGCGCGCCG AGCGCACCCT GCGCGGCGGC GTGCTCGCCC AGCTCGCCGC GGGCCTGCCC
GACGGCCAGT CCGAGCGCTC CCTGCGGCTC GACCTCGACC AGCCCGACGG CCCGTCCGCG
CAGGACTCCC CGCAGGCGAT CCGCGAGGCG TGCGAACAAC TCCTGGAGAT CGCCCGCCGC
CGCCCCGTCG CCATCACCGT GGACGACGTC GAGCACGCCG ACCTGCTCAG CCTCCAGGCG
CTGCTGTACC TGCTGCGCCG GATCGACACC GCGCGAATGA TCGTCGTGCT CACCGAGTCC
GACCACTCGC GCCGCGTCAA CGCCCTGTTC CGCGCCGAGC TCACCCGCAT GTCCCGCTTC
ACCGGGATGC GCCTGTCCCC GCTGTCCCCG CGCGGCGTCG CCCAGGTCAT CACCAGGGAG
CTGGACCCGG CCACCGCCGC CACCGCCTCC GCCCTCACCG TGCACGCCGT CAGCGGCGGG
AACCCGCTGC TGGTCAAGGC GCTGCTCCAG GACCACCGCG CGGCCTCCCT CGGCGGGGCC
GAGCACACCG CCGACGACGC CGTCGTCATC GGCGAGGCGT TCCGCAGGGC CGTCCTGGCC
TGCCTGCACC GCTGGGACCC CGAGCTGCTG GAGGTCGTGC GCGCCGTCGC CGTCCTCGGC
GAGAACGCCA CCCCCGAGCT GCTCTGCCGC TTCCCCGAGC TCACCACCGC CGCCACCGAG
GCCGTCACCT CCCTCAACAG CTCGGGCCTG CTCGACGACG GCCGCTTCCG GCACCCCGCC
GTGCGCGCCG CCGTCCTCGG CGACATCGGC GCCGACGAGC TGACCGAGCT GCACCAGCGC
GCCGCCGAGC TGCTCTACGT GGAGGGCCTG CCCAGCGGCG ACATCGCCAC CCACCTGGTC
GCCGCGGGCG CGGCCACCGC CCCCTGGTCG GTGTCCGTGC TCCGCGACGC CGCCGACAGC
GCCCTGGTCG AGCAGCGGCT CGACCACGCC GCCGACTGCC TCAAGCTGGC CCGCGCCGCC
TGCCCCGCCG ACGACGAGCC GGGCCAGGCC GCCCTGCTCG CCGCGCTCGC CGCCGTCCAG
TGGCGAACAA CGCCGTCCGT GGTCGCCAGG CACCTGCCCG CGCTCGCCGA GGCCGCCGAG
CGCGGCCACC TCGACCCGCG CGACACCGGC GCCCTGCTGC GCTACCAGCT CTGGCACGGC
CGCCGCGCCG AGGCCGGGAC CACCCTGCGC CGCATGGAGG AGGCCGCCGC CAGGCCCGGC
AGCCCCGTCC TGGCCGAGCA CCGCGTGCTG CGCGACTGGG TCCGCTGGCA GCACCCGACC
GTGGCCGCCG CCGCCCGCCC CGCCACCGGG GACCGCCGCT CCGCGCTCGC CCGCGACCAC
CAGGAGGACC TCCTGGCCGC CGCCGAGTGG GTCCTGCGCA ACCGGTGGAT GCCCGACAGC
GCCCCGGAAC TGGTCGTGCA CGCCCTCATG ACGCTCGCCG CGTGCGGGGC CCTCGCCCGC
GCGAAGCACT GGCACGACGC GCTGCGCGAG GAGCTGGGCA CCGGCCAGAA CACCACCTGG
AAGGCCACCC TCGCCGACGC CCGCGCCCAC ATCGCCCTGC TGGAGGGCGA CCTGGCGGGC
GCCGAGCGCC AGGCCCGCCT CGCCCTGGCC ACCCTGTCCC CGCGCAACTG GGGCCAGGCC
ATCGCCTCCC CGCTCGCCGC GCTCGTGCTC GCCACCTCCA CGGCGGGCAA GCACGACGAG
GCCGAGTCCC AGCTCAAGCG CAGCGTCCCG GTGACCGTGC GCGACACCTG GCACTGGGCG
GTGTACCTGC GCGCCAGGGG CCACGCCCAC CTGGCCGCCG GTCGCCCGCA CGCCGCGCTC
GCCGACTTCG AGGAGTGCGG CGAGCTGGCC GTGCACTGGG ACCTGGACCT GCCCGCGCTG
CTGCCGTGGC GCTCGGACGT CGTCCTCGCC CAGTTCGCCC TGGGCCGGGG AGACCGCGCC
GCCGAGCTGG TCCTCGCCCA GCTCGACCGC CCCACCGCCG ACCTGCCGAG GGTGCGCGGC
GCCTCGCTGC GCGCCCTGTC CCGCTCGGCG GAGCTCAAGC AGAGACTGCC CATGCTGCGC
GAGTCCGTAG CCCTGCTGCA GGGCTGCGGC GACCAGGTGG AGCTCTCCCT CGCCCTGGCC
GCCCTGGGCT CGACCCACCA CGCCCTGGGC GAGTTCGGCG CCGCCGAGGT CGTCGCCAAG
CGCGCCGTCC GCACCGCGGA GGCCTGCGGC GCGGGCGCCC TGTGCCGCGC AGCCCTGCCC
GCAGGACTGG TCCTGGACGG CACGCCCACC ACCCCCGAGA CCGAGACCAC CGCCGAGACC
GCTCCCGCGG CCGAACCCGA CGACCTCGCC ACCCTCAGCA CCGCCGAGCG CAGGGTCGCC
GCGCTGGCGG CCATGGGCCA CACCAACCGC GAGATCGGCC GCAAGCTCTA CATCACCATC
AGCACCGTCG AGCAGCACCT GACCAGGGTC TACCGCAAGC TGAAGGTCCG CCGCCGCGCC
GACCTGCCCA CCGGCCTGCC GCTGGAAGCG CTCTCCGCCT GGGGCGCCGA GACGGCGGTG
GGCGCGGCCA GACCAGGCGC GTCACACCGC GCGTGA
 
Protein sequence
MSLVESEHLL DRALALLAES ARGRGQVVHI SGPGASGKTT LLRAFADRAP DDPLLLSATC 
SRAERTLRGG VLAQLAAGLP DGQSERSLRL DLDQPDGPSA QDSPQAIREA CEQLLEIARR
RPVAITVDDV EHADLLSLQA LLYLLRRIDT ARMIVVLTES DHSRRVNALF RAELTRMSRF
TGMRLSPLSP RGVAQVITRE LDPATAATAS ALTVHAVSGG NPLLVKALLQ DHRAASLGGA
EHTADDAVVI GEAFRRAVLA CLHRWDPELL EVVRAVAVLG ENATPELLCR FPELTTAATE
AVTSLNSSGL LDDGRFRHPA VRAAVLGDIG ADELTELHQR AAELLYVEGL PSGDIATHLV
AAGAATAPWS VSVLRDAADS ALVEQRLDHA ADCLKLARAA CPADDEPGQA ALLAALAAVQ
WRTTPSVVAR HLPALAEAAE RGHLDPRDTG ALLRYQLWHG RRAEAGTTLR RMEEAAARPG
SPVLAEHRVL RDWVRWQHPT VAAAARPATG DRRSALARDH QEDLLAAAEW VLRNRWMPDS
APELVVHALM TLAACGALAR AKHWHDALRE ELGTGQNTTW KATLADARAH IALLEGDLAG
AERQARLALA TLSPRNWGQA IASPLAALVL ATSTAGKHDE AESQLKRSVP VTVRDTWHWA
VYLRARGHAH LAAGRPHAAL ADFEECGELA VHWDLDLPAL LPWRSDVVLA QFALGRGDRA
AELVLAQLDR PTADLPRVRG ASLRALSRSA ELKQRLPMLR ESVALLQGCG DQVELSLALA
ALGSTHHALG EFGAAEVVAK RAVRTAEACG AGALCRAALP AGLVLDGTPT TPETETTAET
APAAEPDDLA TLSTAERRVA ALAAMGHTNR EIGRKLYITI STVEQHLTRV YRKLKVRRRA
DLPTGLPLEA LSAWGAETAV GAARPGASHR A