Gene Amir_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2606 
Symbol 
ID8326795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2937510 
End bp2937896 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content73% 
IMG OID644943147 
Productanti-sigma-factor antagonist 
Protein accessionYP_003100388 
Protein GI256376728 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCAGCA TCCGACGTAG CACCGTTCCC ACGACGATCA CCGCCAGCTC CAGCTCCGAG 
GTCACCGTCG TGACCGCGAC CGGCGAGCTG GACGGGGCGG TCACCGACCG GCTGCGCCAC
CACCTCGCCG AGGCCGTGGC CGACACCCCG CCCGCCCTGA TCATCGACTT CGGCGAGGTG
AGCTTCTGCT CCGCCGCCGT GCTCGGCGTG CTGGTGGAGA TCACCGCCGC CGCCGAGACC
GCCGACGTGC GGTGGGCGGT GGTCAGCGAC CAGCGCGCGG TCCGCAGGCC CACCACGCTC
AGCGGCCTTG ACCCCGTCCT GCTGCCGATG ACCAGCGTCC CGGAGGCGTG CGCGTCGCTG
CGCACCCCCG TCGGCGTCAG CGCGTAA
 
Protein sequence
MLSIRRSTVP TTITASSSSE VTVVTATGEL DGAVTDRLRH HLAEAVADTP PALIIDFGEV 
SFCSAAVLGV LVEITAAAET ADVRWAVVSD QRAVRRPTTL SGLDPVLLPM TSVPEACASL
RTPVGVSA