| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2558 |
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| Symbol | |
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| ID | 8326747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2886739 |
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| End bp | 2887677 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644943100 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003100341 |
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| Protein GI | 256376681 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.863347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA ACACCGCACC GCGCTTCACC GCCGCCTCCA CGGCCGCCGA GGTGGTGGCC
GGGATCGACC TGACCGGCAA GCGCGCCGTC GTCACCGGCG CCGCCTCGGG CATCGGCGTC
GAGACCGCCA GGGCCCTCGC GTCCGCGGGC GCCGAGGTCA CCCTGGCCGT GCGCGACCGC
GCCGCCGGTG AGCGCACCGC CGCCGACATC ACCGCCACCA CCGGGAACAC CGCCGTCCGC
GTCGCCCCGC TCGACCTGGC CGACCAGGTC TCGGTGGCCG CCTTCACCGC CAACTGGGAC
GACCCGCTGC ACCTGCTGGT CAACAACGCG GCCGTCATGG CCTGCCCGCT CACCCGCACC
CCCGAGGGGT GGGAGCTCCA GTTCGCCACC AACCACCTCG GCCACTTCGC CCTCACCAAG
GGGCTGCACC GGCACCTCGC GGCGGCGGGC GGCGCGCGCG TGGTCTCGGT CAGCTCCAGC
TCCCACCACC GCTCGCCGGT GGTCTTCGAC GACGTCCACT ACACCGAGCG CGAGTACCAG
GCGTGGGACG CCTACGCGCA GAGCAAGTCC GCGAACGTCC TCTTCGGGGT GAGCGCCACC
ACCAGGTGGG CCGCCGACGG GATCACGGTG AACGCCCTGA TGCCCGGCTC GATCAGCACG
AACCTCCAGC GCCACGTGGA CCTCGAGGAG CTCGCGCGGG CCCGCGCGGC GGCGGGCGTC
ACCGAGGTCC GGCGCAAGAC CCCCGAGCAG GGCGCGGCCA CCTCGGTCTA CGTCGCCACC
GCGCCCGAGC TGGAAGGCCT GGGCGGCAAG TACTTCGAGG ACTGCGCCGA GGCGGGCCCG
TTCGTGCCCG GCGCCAACCG GGGCGTGGCC GACCACGCGC TCGACCCGGA GGCCGCCGAC
CGGCTCTGGG AGGTCTCGCT CCGCACCCTC GCGGGCTGA
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| Protein sequence | MTANTAPRFT AASTAAEVVA GIDLTGKRAV VTGAASGIGV ETARALASAG AEVTLAVRDR
AAGERTAADI TATTGNTAVR VAPLDLADQV SVAAFTANWD DPLHLLVNNA AVMACPLTRT
PEGWELQFAT NHLGHFALTK GLHRHLAAAG GARVVSVSSS SHHRSPVVFD DVHYTEREYQ
AWDAYAQSKS ANVLFGVSAT TRWAADGITV NALMPGSIST NLQRHVDLEE LARARAAAGV
TEVRRKTPEQ GAATSVYVAT APELEGLGGK YFEDCAEAGP FVPGANRGVA DHALDPEAAD
RLWEVSLRTL AG
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