Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2538 |
Symbol | |
ID | 8326727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2860636 |
End bp | 2861100 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943080 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003100321 |
Protein GI | 256376661 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.474386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATCA ACATGATGAC GCGCCCCCAC GATCCAGCGG CCAAGTGGGC CGCACACCCG ACCTGGCTGA TCACGCAGGC CGCGCTGCAC GCGCACCGCC TGGTGGCCGA CGGGCTCGCC GCCGTGGACG CGCGCGGGCA CCACTACCGG GTCCTGGCGA CCCTGGAGCA GACCGGTCCG GTCAGCCAGG CCACCCTCGG GCGGACCAGC GGCATCCACC TCAGCGACGT GGTGGCGGCC ATCAACGAGC TGGCCGAGCG CGGGCTCGTG CACCGCGACC CCGACCCGAC CGACCGGCGC CGCAACACCA TCACCCTCAC CACGGCGGGC CGCAGGCAGC TGCGCAGGCA GGAGCGGCGG CTCGCCAAGG TGCAGGACGA GTTACTCGCG CCGCTGGCGC CCGAGGAGCG GGAGGAGTTG GTGCGGTTGC TCGGCCAGGT GCTGTCCCAC CACCGCAACG GCTGA
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Protein sequence | MVINMMTRPH DPAAKWAAHP TWLITQAALH AHRLVADGLA AVDARGHHYR VLATLEQTGP VSQATLGRTS GIHLSDVVAA INELAERGLV HRDPDPTDRR RNTITLTTAG RRQLRRQERR LAKVQDELLA PLAPEEREEL VRLLGQVLSH HRNG
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