Gene Amir_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2466 
Symbol 
ID8326655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2735872 
End bp2736234 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content73% 
IMG OID644943011 
Productanti-sigma-factor antagonist 
Protein accessionYP_003100252 
Protein GI256376592 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGGGAG ACCGGACTCT GTCGACGTCC ACCGTGCGGG TGGACGAGTC GGTGGTGGTG 
CTGCGCGTGC GCGGCGGCGT GGACGTGGCC ACGGCGCCAG TCCTGCGCGA GGCCCTGGAG
GCCGCGCGGG CGGACGTGGT CGTGGTGGAC CTGACGGGCG TGGACTTCTT CACGTCCTGG
GGAATCGAAC CCCTGGTCCA GTCCCACGAC CGCCTGCTGG ACCGAGCCGG GGCGCTGCAC
CTGGTGGTGA CCAGGCAGAT CCGGCGGGTG CTGAGCTCGG TGGGGCTGCA CCACGTGCTG
CAGATGCACG GGAGCGCGGA GGCGGCGCTC GCGGCGGTGG CCGAGGCGGA CGAGTGGGGG
TAG
 
Protein sequence
MWGDRTLSTS TVRVDESVVV LRVRGGVDVA TAPVLREALE AARADVVVVD LTGVDFFTSW 
GIEPLVQSHD RLLDRAGALH LVVTRQIRRV LSSVGLHHVL QMHGSAEAAL AAVAEADEWG