Gene Amir_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2447 
Symbol 
ID8326636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2718664 
End bp2719629 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content76% 
IMG OID644942992 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003100233 
Protein GI256376573 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.655387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCGCC TGACGACCGT GGACCCGAGG CTGACCGCCG TGCTCGGCGG GCTGTGCATC 
TCGCTGGCCT CGGTGTTCAT CCACTTCTCG AACACCTCCG CGCCGACCAG CGCGTTCTGG 
CGCTGCCTGA TCGCGTTCCC GGTGCTGCTC GCGCTCTACG CGCGCGAACG CCGCACCGAG 
CGCCGCGCCT GCCTGGTCCA GCGGAGGCCG ACGCTGGTCC CGCTGCTGGC CGGCGCCGCG 
CTGGGCGTGG ACTTCGTGCT GTGGGCCGAG GGCATCCGGA TGGTCGGCGC GGGCATCTCC 
ACGGTGCTGC TGTCGGTGCA GGTGGTGATC GTGCCGACCG CCGCGTACCT GCTGCACGGC 
GAGCGCACCA GCCGCCGCTT CGTCGCGACC GTGCCGGTGC TGCTGCTCGG CGTGGTGCTG 
GCCGGCGGCC TGGCGGGCAC CCCGGTGTCC GGCGCCGACC CGCTCGGCGG CGCGCTGGCC 
TCGCTCGGCG CGGGCACGGC GTACGCGTTC TACCTGCTGC TCGTGCGGCG CGGCGGGGGC 
GGCGTGCGGG CGCTGCTGCT GGCCACGGTG TCGGCGGGGG CGGTCGCGGC CGTGTTCGGC 
GTGGTCACCG GGAAGCTGGA CCTGACCCCC GGTTGGGCGT CACTCGGCTG GCTGGCGGCG 
TTGGCGCTCA TCGGGCAGAT CGTGGGCTGG CTGCTGATCT CGGCGGCGCT GCCCCGGATG 
CCCTCGTCCA CGGGCGCGGC GCTGATGCTG GTCCAGCCGG TCGGGTCGGT GGTGCTCGGC 
ATCGCGCTCA TGGGCGAGCG CCCGAACGCG ATCCAGCTCG TCGGCTGCGC GGCCGTCCTC 
CTGGCCGTCT ACGCCGGAAC CCGCGCCCCG CGCGCCACCC CGGAGCCCGC AGCCCCGGAG 
CCCGCAGCCT CCGAACCCGC CACCCCCGAA CCCGCCACCC CGGCGAACCT CGCCGCGCGT 
TCCTGA
 
Protein sequence
MTRLTTVDPR LTAVLGGLCI SLASVFIHFS NTSAPTSAFW RCLIAFPVLL ALYARERRTE 
RRACLVQRRP TLVPLLAGAA LGVDFVLWAE GIRMVGAGIS TVLLSVQVVI VPTAAYLLHG 
ERTSRRFVAT VPVLLLGVVL AGGLAGTPVS GADPLGGALA SLGAGTAYAF YLLLVRRGGG 
GVRALLLATV SAGAVAAVFG VVTGKLDLTP GWASLGWLAA LALIGQIVGW LLISAALPRM 
PSSTGAALML VQPVGSVVLG IALMGERPNA IQLVGCAAVL LAVYAGTRAP RATPEPAAPE 
PAASEPATPE PATPANLAAR S