| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2446 |
|---|
| Symbol | |
|---|
| ID | 8326635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2717664 |
|---|
| End bp | 2718590 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644942991 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003100232 |
|---|
| Protein GI | 256376572 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.415246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGGGT TGGAGAGGTT GCGGGCGCTG CACGCGGTGG CGGCGCACGG TTCGGTCGCG
GGAGCGGCGG CGGCGCTGCA CGTGACGCCC TCCGGGGTGT CGCAGCAGCT GGCCAAGCTG
GAGCGGGAGG CGGGTCAGCC GCTGCTGGAG CCGAGGGGGC GCGGGGTGCG GCTGACCACG
GCCGGGCACG TGCTGGCCGG GCACGCGGGG CGGGTGCTGG AGCAGCTGGC GCGGGCGCGG
GCCGAGCTGG ACCTGCTGCG GGAGGACGTC ACGGGGACGC TGCGCGTGGG CGCGATCCCG
ACCACCCTGC AGGCCCTGCT GCCACCCGCG CTGGGGGCGC TGCGGGAGCG GCACCCGGAC
CTGGCGGTGG TGCTGCGGGA GGGCGAGGCG GAGGAATCGC TGCCCCGGCT GGTGTCGGGC
GAGCTGGACG TGGCGGTCCT GGACAGCTGG GACAACCTGC CGGTGCAGCT GCCGGAGGGG
GTGGTGTGCG TGGAGCTGAT GGCGGACGTG GCCGACCTGG CGCTGCCCGC CGGTCACCGG
CTGGCGCACC GGCGGGTGGT GGACCTGGCC GAGGTGGACG ACATCGGGTG GATCGGGTGG
AGCGTCGGGA CCGGGTGCCA CGGGTGGCTG GAGCACGTGC TGCGCGGGGA GGGGCTGGGC
GGGCGGATCA CGAGCGCGGT CGGCGGGTAC CCGACGCAGC TGGCGCTGGT GGCGGGCACG
GTCGGGGCGG CGGTGGTGCC GAGGCTGGGG CGGGTGGTGG TGCCGGAGGG GGTGCGGATG
ATCGCGACCC GGCCGGTGCT GGGGCGGCGG ATCCTGGCGG TGACTCGGGC GGAGGACGTG
GAGCGGGGGG TGGTGCGGGC GTGTGTGGAC GTGCTGCGGG AGGTGGCGGA CCGGTTCACG
CAGGGGGAGG TGGGGGTGGC GCGGTAG
|
|---|
| Protein sequence | MFGLERLRAL HAVAAHGSVA GAAAALHVTP SGVSQQLAKL EREAGQPLLE PRGRGVRLTT
AGHVLAGHAG RVLEQLARAR AELDLLREDV TGTLRVGAIP TTLQALLPPA LGALRERHPD
LAVVLREGEA EESLPRLVSG ELDVAVLDSW DNLPVQLPEG VVCVELMADV ADLALPAGHR
LAHRRVVDLA EVDDIGWIGW SVGTGCHGWL EHVLRGEGLG GRITSAVGGY PTQLALVAGT
VGAAVVPRLG RVVVPEGVRM IATRPVLGRR ILAVTRAEDV ERGVVRACVD VLREVADRFT
QGEVGVAR
|
|---|
| |