| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2423 |
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| Symbol | |
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| ID | 8326612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2691969 |
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| End bp | 2692757 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644942968 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003100209 |
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| Protein GI | 256376549 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.312267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA ACCTCGCCGG GAAGCGCGTC CTGGTGACCG GAGCCAGCAA GGGCATCGGC
CTGGCCACCG TCCGGGCCTT CCTGGCCGAG GGCGCGTCGG TCGTCGCCGT CTCCCGCGGC
GCCACCCCCG AGCTGGCGGA CACCGGGGCC GAGTTCGTCG CCGCCGACCT GTCCACCCCG
GACGGCCCGC GCCACGCCGT CGAGACCGCG CTCGCCGCGA ACCCGCGACT GGACGTGCTG
GTCAACAACG CGGGCGGCGG CGAGCTGCCG GACGGCGCGC TCGCCGACCT GCTCGACGGC
GACGACGCGA CCTGGCTCGA CTCGTTCCAG CTCAACCTCG GCGCCGCCCT CCGCACCACC
CGCGCCGCGC TCCCCGCGCT GATCGAGGCG CGCGGCGCGA TCGTCAACAC CGGCAGCAGC
AGCGCCCGCC AGCCCCAGGG CGTCCCGCTG CACTACTCCG CCGCCAAGGC CGCCCTGAAC
GCGTTCTCCA GGGGCCTGGC GGAGAAGCTG GCCCCGCAGG GCGTGCGGGT GAACGTGGTG
ACCCCCGGCG GCACCCGCAC CGCGATCATG GCGGGCCCGG ACGGCTACAT CGCCAGGGTC
GCCGCCCACC TCGGCGTGGA GCACGCGGAG CTGCTCGCCG CGATGCCCGC GCAGAACGGG
ATGCTCACCG GCGCCCTCAT CGAGCCCGAC GAGATCGCCC GCGCGATCCT GCTGCTGGCC
TCCCCGACCC TGCCGAGCGC GATCGGCCAG AACTGGGCGA TCGACGCGGG CTCCCTCAAG
TTCGTCTGA
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| Protein sequence | MDLNLAGKRV LVTGASKGIG LATVRAFLAE GASVVAVSRG ATPELADTGA EFVAADLSTP
DGPRHAVETA LAANPRLDVL VNNAGGGELP DGALADLLDG DDATWLDSFQ LNLGAALRTT
RAALPALIEA RGAIVNTGSS SARQPQGVPL HYSAAKAALN AFSRGLAEKL APQGVRVNVV
TPGGTRTAIM AGPDGYIARV AAHLGVEHAE LLAAMPAQNG MLTGALIEPD EIARAILLLA
SPTLPSAIGQ NWAIDAGSLK FV
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