Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2400 |
Symbol | |
ID | 8326589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2659363 |
End bp | 2660220 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942945 |
Product | Luciferase-like monooxygenase |
Protein accession | YP_003100186 |
Protein GI | 256376526 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00843006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCG GTATCGCGTT ACCCCAGTTC GGTCCCCAGA GCAGGCGCGT GGACGAGATC ATCCCCTTCG CCGTCGAGGC CGAGCGCCTC GGCGCGGCGA GCCTGTGGGT CGCCGACCGC CTGTACGCCC CCGCCGAGCC CGTCGTCGGC TACGCGGGCG GCGACGACGT CCCGGCCGAG TTCCGCCGGG TCTTCGACCC GTTCGCGCTG CTCTCGGCGG TCGCCACGCA CACCTCCACC GCCACCCTCG GCAGCAGCGT GCTGAACCTG CCCTGGTACC AGCCGGTGGC CCTCGCCCGG CTGCTCACCT CGATCGACCT GCTCAGCGGC GGCAGGCTGC TGCCGGGGTT CGGCATCGGC TGGTCGCCCG ACGAGTACAA GGCGTCCGGC GTCCCGTGGA AGGGCAGGGG CGCGCGCTTC GACGAGGCGC TGGACCTCCT CGACCTGGCC TGGACCGCCG ACGTCCTGTC CTACGAGGGC GAGCACCACT CGGTCCCGGC CGGCTACGTG GACCTCAAGC CCGCCCGCAA GCCCCCGGTG CACCTGGGCG GCTTCTCGAA GACCGCGCTC CAGCGCATCG CCCGGCGCGG CGCGGGCTGG CTGCCGGTCC TGCAGGTCGG GACCACCGCG CAGGACCCGG CCCCGCTGGT GGCCGTCCGC GAGCAGATCG GCGCGCCCAC CCCGGCCGTG CTGCGCCTCA ACGCCCGCCG CGACACCCCG CTGAGCGCCC TCGCGGACAC CGCGCTGGCC TCGGCGCAGG CCGGGTTCGA CGACCTGTTC GTCGACCTGT CGTACGTGGT GGACGAGCCG TCCGAGGCGC TGGACCGCTT CGCCGACCTG CTGGCGAAGA CGGCCTGA
|
Protein sequence | MRIGIALPQF GPQSRRVDEI IPFAVEAERL GAASLWVADR LYAPAEPVVG YAGGDDVPAE FRRVFDPFAL LSAVATHTST ATLGSSVLNL PWYQPVALAR LLTSIDLLSG GRLLPGFGIG WSPDEYKASG VPWKGRGARF DEALDLLDLA WTADVLSYEG EHHSVPAGYV DLKPARKPPV HLGGFSKTAL QRIARRGAGW LPVLQVGTTA QDPAPLVAVR EQIGAPTPAV LRLNARRDTP LSALADTALA SAQAGFDDLF VDLSYVVDEP SEALDRFADL LAKTA
|
| |