| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2348 |
|---|
| Symbol | |
|---|
| ID | 8326537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2605667 |
|---|
| End bp | 2605984 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644942893 |
|---|
| Product | flagellar hook-basal body complex protein FliE |
|---|
| Protein accession | YP_003100134 |
|---|
| Protein GI | 256376474 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCC CGATCGCCGC GATCGGCGGC TCCCCCACTC CCCCCGCGGT CGTCGCGCCC
ATCGCGGCGA CCGGAGCGGA CTCGGCGACG GCTGCCGGCT CCGCGAGCGG GTCGCTGTTC
TCCGGGGTGC TCGACGGCAT CCAGCAGGCG CAGGCCAAGT CGGACTCGCT GGCCGTGCAG
GCCGCCACCG GGACGCTGGG CGACGTCCAC GACTACCTGG CGGCCAGCAC TGAGGCCGGC
CTGCGGGTGC AGATGACCGT CGCGATCCGC AACAAGGCCG TCGAGGCCTT CAACGAGATC
ATGAGGTTGC AGGCATGA
|
|---|
| Protein sequence | MTAPIAAIGG SPTPPAVVAP IAATGADSAT AAGSASGSLF SGVLDGIQQA QAKSDSLAVQ
AATGTLGDVH DYLAASTEAG LRVQMTVAIR NKAVEAFNEI MRLQA
|
|---|
| |