| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2344 |
|---|
| Symbol | |
|---|
| ID | 8326533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2600996 |
|---|
| End bp | 2602315 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644942889 |
|---|
| Product | ATPase, FliI/YscN family |
|---|
| Protein accession | YP_003100130 |
|---|
| Protein GI | 256376470 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.654751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGAC TGCTGGACGA GCGTTTCGCA CCTGCCCTGG CCGCGGCGAA GCCGCAGGTC
ATCGGCCGGG TGACCGGTGT GGTGGGGTTG TCGGTGACGG TGGCGGGCAT CAGCGCCCGC
ATCGGCGACC TGGTGCGGAT CGGGTCCGGC GGTCAGGAAG TGCTGGCCGA GGTGGTGGCG
CTGGGCGCGG GCAAGATCAC CTGCCTGCCG CTGGGCGCGC TGGGCGGCAT CGGCCTCGGC
GCCGAGGTCG TGAGCACGAA CCGGCCGCTG CAGATCGCCG TGGGCGAGCA GCTGCGCGGC
CGGGTGCTGG ACGGGCTGGG GCGGCCGATG GACGGCGGGC CGCCGCTGGT CGGGCTGGAG
TCGGTGACGG TGGACATGAC CCCGCCGTCG GCGCTGCAGC GCCAGCTGAT CGACAAGCCG
CTGCAGCTGG GCGTGCGCGC GCTGGACACG ATGGTGCCGT GCGGGCAGGG CCAGCGCATC
GGGATCTTCG CGGGCTCGGG CGTGGGCAAG TCGAGCCTGC TGTCGATGAT CACGCGCGGC
ACCGAGGCGG AGATCACCGT GGTCGCCCTG ATCGGCGAGC GCGGTCGCGA GGTGCGCGAG
TTCATCGAGA ACGACCTGGG CCCCGAGGGC CTGGCCCGCT CGGTCGTGGT CGTGGCGACC
TCCGACCAGC CGCCGATGGT GCGGCTGCGC GCGGGGTTCG TGGCCACCCG CATCGCCGAG
TGGTACCGGG ACCGGGGCGC GAACGCGCTG CTGATGATGG ACAGCCTCAC CCGCATCGCG
ATGGCGCAGC GCGAGGTGGG CCTGTCCGCG GGCGAGCCGC CCGCGACGCG GGGCTTCCCG
CCGTCGGTGT TCGCGCTGAT GCCGACCCTG CTGGAGCGGG CCGGACCGGC CGAGCGCGGC
AGCATCACCG GCCTGTACAC GGTGCTGGTG GAGGGCGACG ACCACAACGA GCCGATCGCC
GACACCGCCC GGTCCATCCT GGACGGCCAC GTGGTGCTGG ACCGCAGGCT CGCCACCTCG
GGGCACTTCC CCAGCATCGA CGTGCTGGAG TCGGTGTCGC GGGTGACCGG CGCGGTGACC
ACGCCCGAGC AGCGCGCCGA CGCGGCGCAG CTGCGCAGGC TGCTGGCGGC CCGCCGGGAC
GTGCGGGAGC TGGTGGAGAT CGGCGCCTAC GTCGGCGGCA CGAACCTGGA CGCGGACCGC
GCCATGGCGC TGGAGCCGCG CATCAACGGC CTGCTCACCC AGGACATCCA CGCGCGCACC
AGCGCGGAGT CGTCCTGGGA GGAGCTGCGG GAACTGCTGC ACGGGGGTAT GCGGGGATGA
|
|---|
| Protein sequence | MTGLLDERFA PALAAAKPQV IGRVTGVVGL SVTVAGISAR IGDLVRIGSG GQEVLAEVVA
LGAGKITCLP LGALGGIGLG AEVVSTNRPL QIAVGEQLRG RVLDGLGRPM DGGPPLVGLE
SVTVDMTPPS ALQRQLIDKP LQLGVRALDT MVPCGQGQRI GIFAGSGVGK SSLLSMITRG
TEAEITVVAL IGERGREVRE FIENDLGPEG LARSVVVVAT SDQPPMVRLR AGFVATRIAE
WYRDRGANAL LMMDSLTRIA MAQREVGLSA GEPPATRGFP PSVFALMPTL LERAGPAERG
SITGLYTVLV EGDDHNEPIA DTARSILDGH VVLDRRLATS GHFPSIDVLE SVSRVTGAVT
TPEQRADAAQ LRRLLAARRD VRELVEIGAY VGGTNLDADR AMALEPRING LLTQDIHART
SAESSWEELR ELLHGGMRG
|
|---|
| |