Gene Amir_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2336 
Symbol 
ID8326525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2594116 
End bp2595003 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content71% 
IMG OID644942881 
ProductOmpA/MotB domain protein 
Protein accessionYP_003100122 
Protein GI256376462 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.279433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCG GCGGCGGGCG CAAGAACAAG CACGAGGAGC AGCACGTCCA CGACGAGCGG 
TGGATGGTCA CCTACGCGGA CATGATCACG CTGCTCATGG TGCTCTTCAT CGTCATGTTC
GCCATGTCCT CGGTGGACTC GCAGAAGTTC CAGGAGCTGA AGAAGAGCCT GGCGGGCGCG
TTCAGCGGCT CGGACCACAT CACGGTGTTC GGCGCGGGCG GCGCGGGCAG CGCCAACGGC
GGCATCAACC CCGACCCGGT GGACCTCAAG AGCGAGGCGA GCGGGTCGGG CAGCACGCAG
GACCTGAGCT CGAAGGCCGC GCAGGAAGCG GTCCAGCAGG CCGACCGCCA GAAGGCCGCC
AAGAACCTCA AGGCCGCCGA GGCCGAGGTC CAGCACCTCA AGGAGCTGGG CGAGCAGATG
GCGAAGCAGC TGCAGGACCA GGGCCTGGGC GGGACCGCCC AGTTCCGGGT GGACGACCGG
GGCCTGGTGG TCACGGTGGT CACCACGTCG GTGGTCTTCG CGGGCGACCG CGCCGAGCTG
CTGCCCGACG GGCAGCGGAT CGTCGACGCG CTGGCGCCGG TGCTGAAGTC CGTCGGCAAC
CGGGTCGAGG TGGACGGGCA CACCAACCAG CTGCCCGTGG CCACGGTGAA CTACCCGAGC
AGCTGGGAGC TGTCCACGGC GCGCGCGTCC AGCGTGGTGC GCTACCTGAT CGAGCGGGAC
GGCCTGGCCT CGGACCGGCT GACCGCGGTC GGCTACGCCG ACACCAGGCC GCTGTACGAC
CCGGCGGACC CGCGGTCGGT GACCGGCAAC CGCCGGGTGG AGGTCGTGGT GCTGTCCGAC
CAGCCCACCG AGGTCCGCAC GCTGCTGCCC GCCGCAGCGG CCGGGTGA
 
Protein sequence
MSGGGGRKNK HEEQHVHDER WMVTYADMIT LLMVLFIVMF AMSSVDSQKF QELKKSLAGA 
FSGSDHITVF GAGGAGSANG GINPDPVDLK SEASGSGSTQ DLSSKAAQEA VQQADRQKAA
KNLKAAEAEV QHLKELGEQM AKQLQDQGLG GTAQFRVDDR GLVVTVVTTS VVFAGDRAEL
LPDGQRIVDA LAPVLKSVGN RVEVDGHTNQ LPVATVNYPS SWELSTARAS SVVRYLIERD
GLASDRLTAV GYADTRPLYD PADPRSVTGN RRVEVVVLSD QPTEVRTLLP AAAAG