Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2309 |
Symbol | |
ID | 8326498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2565264 |
End bp | 2566280 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644942854 |
Product | hypothetical protein |
Protein accession | YP_003100095 |
Protein GI | 256376435 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00941536 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATGTGG TGCCCTCGCA GGTCTCAGGT GAGCGGTCGG CCGTCGAGCG GGTGGTCAGC CCCCCGTTGC CGTTGCCGCG CGGGGCGCTG TCCGAAGGGG TGGTCGCCGC GCTTCGCGGG GGTGGGCTGC TGCCTGCCGT CGGGGACCAG GACCCGTGGG GCGACGACCT CCAGCTCGCC CTCCACACCC TCTACGAGCT GCACTACCGG GGGTTCGACG GGGTCGACCC CGACCTGGAG TGGGACTCCC GGCTGCTTGA GCTGCGCGGT GGGCTGGAGC GGCGGTTTCT CGGGGCGGTG CGGGATGAGT TGGGCGGGGC GCCCTCGTTG GACGAGGTGC TCGGCGAGTT GCTCGTCGAA CCCGTCGACG GCAGCGGGAT CAGCCACCAC CTCAAGGGCG GTGGGGAGTG GTGGCAGATG CAGGAGCATC TTGCTCACCG GTCCGTGTAT CACTTGAAAG AGGCTGATCC CCACGCTTGG GTGATCCCTC GGTTGACCGG GCGTGCCAAG GCCGCGTTGG TCGCGGTGGA GTTCGACGAG TTCGGTGGTG GGCGCCCCGA GCGGATGCAC TCGGAGTTGT ACGGGCGGTT GCTCACCGGA GCCGGGTTGT CCCGCGAGTA CCTGTCCTAT CAGGACAGTG CGCCCGCACC GATGTTGGCC GTGGTCAACC TGATGTCGGC GTTCGGGTTG CGCCGCTCGC TGCGCGGCGC CCTGGTCGGG CACTTCGCCG CCGCCGAGAT CACCACCGCG CCGAGCGCCA AGCGCATGGC GGCGGCGCTG GAGCGGATGG GCGCGCACCC GGACTGCGTC GAGTTCTTCA CCGAGCACGT CGAGGCCGAC GCGGTGCACG AGCAGGTGGT GCGGCACGAC GTCATCGGCG ACCTGCTCCG CCGGGAACCC GAGCTGACCC AGGATGTGGT GCTGGGCGTG CGGGCGACGG AGCTGGTGGA GGGGCGCTAC GGCGAGCACG TGCTGGGCGC GTGGACGCGG GGCGAGAGCT CGACCTACCG GCGCTGA
|
Protein sequence | MDVVPSQVSG ERSAVERVVS PPLPLPRGAL SEGVVAALRG GGLLPAVGDQ DPWGDDLQLA LHTLYELHYR GFDGVDPDLE WDSRLLELRG GLERRFLGAV RDELGGAPSL DEVLGELLVE PVDGSGISHH LKGGGEWWQM QEHLAHRSVY HLKEADPHAW VIPRLTGRAK AALVAVEFDE FGGGRPERMH SELYGRLLTG AGLSREYLSY QDSAPAPMLA VVNLMSAFGL RRSLRGALVG HFAAAEITTA PSAKRMAAAL ERMGAHPDCV EFFTEHVEAD AVHEQVVRHD VIGDLLRREP ELTQDVVLGV RATELVEGRY GEHVLGAWTR GESSTYRR
|
| |