Gene Amir_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2307 
Symbol 
ID8326496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2564267 
End bp2564923 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content79% 
IMG OID644942852 
Productmethylase 
Protein accessionYP_003100093 
Protein GI256376433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00537] HemK-related putative methylase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000535165 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTC CCGTGCTGCT GCTGAGACCA CCGGGCGTCT ACCGCCCGCA GGAGGACACC 
GAGCTGCTGG CCCGTTCGCT GGCCGAGTCC GGTGTCCCGC ACGGGGCGAC CGTGCTGGAC 
GCGTGCACCG GGACCGGGGC GCTCGCCGTC GCGGCCGGGC GCGCCGGGGC GGGGGAGGTG 
ACCGCCGTCG ACCGGAGCCG CCGCGCGGTG GCCGCCGCGT TCGTGAACTG CCTGCTGCAC 
GGGGTGCCCG TGCGGGTGCG GCACGGGGAC TTCTCGACCG TGGGCGGGCG GTACGACGTG 
GTGTGCTCGA ACCCGCCCTA CGTGCCCGCG CCCGGCCCGC CCGATCCGAC CGGCGCGGCG 
CGCGCGTGGG ACGCCGGGGC GGACGGGCGC GCGGTGCTGG ACCGGTTGTG CGCGGCGCTG 
CCGTCGCTGC TCGCGCCCGG CGGGTTCGGG CTGGTCGTGC ACTCCGCGCT GTGCGGGGTG 
GAGCGGACGC TCGGGCAGCT GCGGGACGGT GGGCTGGCGG CCGAGGTGGT GGCGTCGCGG 
GACGTCGGGT TCGGGCCGGT GCTGCGCTCG CGGGCCCGGT GGTTGGAGGG GCGCAGGCTC 
ATCGCGCCGG GGCAGCGGCA CGAGCGCCTG GTGGTGGTCC GTGCCGACGC CCCGTGA
 
Protein sequence
MTPPVLLLRP PGVYRPQEDT ELLARSLAES GVPHGATVLD ACTGTGALAV AAGRAGAGEV 
TAVDRSRRAV AAAFVNCLLH GVPVRVRHGD FSTVGGRYDV VCSNPPYVPA PGPPDPTGAA 
RAWDAGADGR AVLDRLCAAL PSLLAPGGFG LVVHSALCGV ERTLGQLRDG GLAAEVVASR 
DVGFGPVLRS RARWLEGRRL IAPGQRHERL VVVRADAP