Gene Amir_2290 details

Gene Information

• Locus tag: Amir_2290
• ID: 8326479
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 2548308
• End bp: 2549093
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644942835
• Product: hypothetical protein
• Protein accession: YP_003100076
• Protein GI: 256376416

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000570913
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGCTG CGGTGAGCAG GACGCCGGTC CGGATCGGCC CGAGGGCAGC CGCGTCGCTG 
CTGGTGGCGG GCGCGATCAG CCTGATCGCG TTCGGCTGGC CGCTGCTCGT GGAACCGGGC 
GCCGGGATCG CGCGCTCGAC GGACGCGCCA TGGCTGTTCG CCCTGCTGCT GCCGCTGGTG 
ATCGCGGTGG TGCTGGCCGA GCTGAGCGAG GGCGGCCTGG ACTCGAAGGC GGTCGCCGTG 
CTGGGCGTGC TGTCCGCGCT GGGCGCGGCG GTGCGACCGC TGGGGGCGGG CACGGCGGGC 
GTGGAGACGG TGTTCTTCCT GCTGGTGCTG GGCGGGCGGG TGTTCGGCCC CGGTTTCGGC 
TTCGTGCTGG GCAGCACGAC CCTGTTCGCG TCGGCGCTGC TGACCGGCGG GGTGGGGCCG 
TGGCTGCCGT ACCAGATGAT CGGCGCGGCC TGGGTGGGCC TCGGCGCGGG GCTGCTGCCG 
CGCTGCCGGG GGTGGCGGGA GCTGCTGGTG CTGTCCGCGT ACGGGGCGGT GGCCGGGCTC 
GGGTACGGGC TGCTGCTGAA CCTGTCGTTC TGGCCGTTCG CGCTGGGCGC GCACAGCGAC 
CTGTCGTTCC AGCCGGGCGA GCCGGTGTGG TCGAACCTGA CCAGGCTGGC GCTGTTCAGC 
CTGGCCACGT CGCTGGGCTG GGACGTGGGG CGGGCGATCA CCACGGCCCT GCTCGTGGCG 
ACCACCGGCC CGGTGCTGCT GCGCACGATG CGCAGGGCGG CCCGCAGAGC CGCGTTCACC 
CGCTGA 

 

Protein sequence

MSAAVSRTPV RIGPRAAASL LVAGAISLIA FGWPLLVEPG AGIARSTDAP WLFALLLPLV 
IAVVLAELSE GGLDSKAVAV LGVLSALGAA VRPLGAGTAG VETVFFLLVL GGRVFGPGFG 
FVLGSTTLFA SALLTGGVGP WLPYQMIGAA WVGLGAGLLP RCRGWRELLV LSAYGAVAGL 
GYGLLLNLSF WPFALGAHSD LSFQPGEPVW SNLTRLALFS LATSLGWDVG RAITTALLVA 
TTGPVLLRTM RRAARRAAFT R