| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2281 |
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| Symbol | |
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| ID | 8326470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2535438 |
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| End bp | 2538869 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942826 |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_003100067 |
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| Protein GI | 256376407 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.603289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCC GCAAGGGACC CGTCACCAGG GTCGACCCGT CCGCTTTCGA CAGCGCGGGC
GCCAAGGTGA TCGACAACTC CCTCACCACC GAGATCGAGG ACTCGTACCT GGAGTACGCG
TACTCGGTCA TCCACTCCCG CGCCCTGCCG GACGCGCGAG ACGGCCTCAA GCCGGTGCAC
CGCCGGATCC TGTTCTCGAT GAACGAGCAG AACCACCGGC CGACCTCGCC GTACGTGAAG
TCCTCCCGCG TGGTCGGTGA CTGCTTCGTG CGGGGCGCGC TCGTGTCCAC CCCCTCGGGG
GTGCGGCCGA TCGAGGAGAT CGTGGTCGGC GACCACGTGC TCGACCCGGC GGGTGCGCCC
GTCCGGGTGG CGCAGGTGTA CGAGAACCCG GTGTCCGAGC TGGTCAGGGT CACGTTCTCG
GACGGCCGGA CCATCCTGGT CACGCCGGGG CAGCGGTTCC GGGTCCACGC GGCCGGGGAC
GCGGGCGCAG CGGGCGTCGA GTGGGTCGCC GCGCGCGACC TGGTCGGCCG CCACGCGGTC
GCCTTCGGCC CCGGCCGCGC GTCCGCGCTG CTCGGGGAGG GCGACCAGTA CGCCCACGTG
CTGGGCCTGC TCGCCTCGGC GGGCGTCGAC GGTCAGCGGC TGCGGCTGAC CGACGAGGGC
CCGGCGGACG CCGTCCACGG CTGGGCCATC GCCGCGAACG TGGCCGTGAC CAGGGACAAG
CTGCCCGCCG AAGGCCCTGG GGGCCGCGAC GTGCACGTGC TCGACCTGGA CGGCCACGTC
GGCGTGCGCG CCGCTGTCGC CTCCGGGGCA GCGCCCGCCG CCGTGCTCCT CCAGCGCGGC
CGGTGGGCGG CGTTCCTCGC GGGCGTCTTC GACGGCGCGG GCTCGGTGCG CGACGGCGAG
GTCGTCCTCG GCGTGCGCAC CGCGCTGCTC GCCGAGCAGG TCGGCGCGCT GCTGGCCGAC
TGCGGACTGC CCGCGACCAG GGCGGACGGC GAGATCCGGC TGTCCGGCGG GGCCGCCGCC
ACGCTCGGCG CCGTCCTGCT GCCGTGGGCC CGCTCGGACG CCGAGCAGGA CCTGCGCGAG
CTGACCGGGG CGTCGCAGGC CCCGGCCCCG GAGGTCGTGT CGGTGGAGCC GGTCGCCCCG
GACACCACCT ACGACATCCA GGTCGACGCC GACGAGCACG CGTTCGTCGT GGACGGCCTC
GTCGTGCACA ACTGCATGGG CAAGTACCAC CCGCACGGCG ACACCGCGAT CTACGACGCG
ATGGTGCGGC TGGCGCAGGA CTTCTCGCTC AACACCCCGC TCATCGACGG CCACGGCAAC
TTCGGCTCCC CGGACGACGG ACCGGCTGCC TCGCGCTACA CCGAGGCCCG CATGTCCGGC
GCGGCGATGC TGCTGGTCGG CGAGCTGGAC GAGGACACCG TCGAGTTCCG CCCGAACTAC
GACGGCTCCC TCACCGAGCC CGCCGTGCTG CCTGCCGCGT TCCCGAACCT GCTGGTCAAC
GGCACCTCGG GCATCGCGGT CGGCATGGCG ACGAACATGA TCCCGCACAA CCTCGGCGAG
GTCGTGGCGG CGGCGAGGCA CCTGGTCAAG CACCCGGACG CCGACCTGGA AAAGCTCATG
GAGTTCATCC CCGGCCCCGA CCTGCCCACG GGCGGGATGC TGCTGGGCCT GGACGAGGTG
CGCAAGGCGT ACGAGACCGG GCGCGGCGTG GTGCGGATGC GCGCCACGGT CACCACCGGG
CCGCTGGAGG GCAGTCGGGG CAGGCAGGCG ATCACGGTCA CCGAGCTGCC GTACGGCGTC
GGCCCGGAGA AGATCATCGA GAAGATCACC GACGAGGTGA ACAAGTCCAA GCGGCTCACC
GGCATCGCCG ACGTCAAGGA CCTCACCGAC CGGGAGAACG GCATCCGCCT GGTCATCGAG
TGCAAGGTCG GCGTCAACCC GCAGGCGCTG CTGGCGGACC TGTACCGGCT CACCCCGCTG
GAGCAGTCGT TCGGCATCAA CAACCTGGTG CTGGTCGACG GGCAGCCCCA GACGCTCGGG
CTCAAGGCGC TGCTGGAGGT GTTCCTGGCC CACCGGTACG AGGTGGTCAC CCGGCGCACC
AGGTTCCGCC GCCGCAAGCG CGAGGACCGG CTGCACCTGG TCGACGGCCT GCTCAAGGCC
CTGATCGACA TCGACAAGGT GATCAAGCTG ATCCGCCGCA GCGAGAACGC GCAGGCCGCG
AAGGAGGGCC TGGTCTCCAC GTTCGCGCTG TCCGAGACCC AGGCCGCGTA CATCCTGGAC
ACGCCGCTGC GCCGCCTCAC CCGGTTCGAC TCGGTCGAGC TGGAGGGCGA GCAGGAGCGG
CTGCGGGGGG AGATCGCCGA GCTGTCCACG ATCCTCGACG ACGACAAGGT GCTGCGCCGG
GTCGTGTCGA ACGAGCTGGG CAAGGTCGCC AAGGACCTCT CCGCCGAGCG CCGCACCACG
CTGCTCGACG GCGACCTGAA GGAGGTGCTG GCCGCCTCGC GCACCTCCGG TCCGCTGGAG
GTCGCGGACG ACCCGTGCCA GGTCGTGCTG TCGGCGACGG GCCTGGTGGC GCGCACCGCC
GCCGAGTCCG AGGAGGCCGT GGAGGGGCGC AAGCGCAGCG GCCGGGCCAA GCACGACGCG
GTGGCGGCGA CCGTGCACAC CACCGCGCGC GGGCAGGTGC TGCTGGTGAC CAGCAGGGGC
CGCGCGTTCA AGACCGACGT GCTGCCGCTG CCGGTGCTGC CGCAGGGCGA GGGCACGCTC
TCGCTCAGCG GCGGGGTGCC GGTGCGCGAG CTGGTGGGCC TGGAGGCGGG GGAGCGGGTG
GTCGGCATCG CCCCGCTGGG CGAGACCGAC TCGCCGGGGC TCGCGCTCGG GACCAAGCAG
GGCGTGGTGA AGGTGTGCGC GCCCGAGTGG CCGGTGCGGT CGGACGAGTT CGAGGTGATC
GGGCTCAAGG CCGGTGACGA GGTCGTGGGC GCGCAGTGGC TGGCCGACGG CCAGGAGGCG
CTGGTGTTCG TGTCCTCGGA GGCGTCGCTG CTGCGGTACG CGGCGTCGCT CGTGCGCCCG
CAGGGCCTGC GCGGCGGCGG CATGGCGGGC ATCACGCTGC CGGGGGAGGC GTCGGTGGTG
TTCTTCGGCG CGGTGCGCAC GGACGACGCC GAGCACGGCG AGCCGGTGGT GGTGACCTCG
ACCGGGCAGA GCGTGAAGGT GACGCCGTTC GACCTGTACC CGGCGAAGGG GCGGGCGACC
GGCGGTGTCC GGGCGCACCG GTTCCTCAAG GGCGAGGACG GGCTGGTGCT GGCGTGGGTC
GGCGCCCGGC CCGCCGCGGT GACCGAGTCG GGGGCGGCGG TGGAGCTGCC GGAGATCGAC
CCGCGCCGGG ACGGCTCGGG CGCGCCGCAC CCCGGTCCGG ACGTGATCGG GCACCTGGTG
GAACGCGCCT AG
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| Protein sequence | MARRKGPVTR VDPSAFDSAG AKVIDNSLTT EIEDSYLEYA YSVIHSRALP DARDGLKPVH
RRILFSMNEQ NHRPTSPYVK SSRVVGDCFV RGALVSTPSG VRPIEEIVVG DHVLDPAGAP
VRVAQVYENP VSELVRVTFS DGRTILVTPG QRFRVHAAGD AGAAGVEWVA ARDLVGRHAV
AFGPGRASAL LGEGDQYAHV LGLLASAGVD GQRLRLTDEG PADAVHGWAI AANVAVTRDK
LPAEGPGGRD VHVLDLDGHV GVRAAVASGA APAAVLLQRG RWAAFLAGVF DGAGSVRDGE
VVLGVRTALL AEQVGALLAD CGLPATRADG EIRLSGGAAA TLGAVLLPWA RSDAEQDLRE
LTGASQAPAP EVVSVEPVAP DTTYDIQVDA DEHAFVVDGL VVHNCMGKYH PHGDTAIYDA
MVRLAQDFSL NTPLIDGHGN FGSPDDGPAA SRYTEARMSG AAMLLVGELD EDTVEFRPNY
DGSLTEPAVL PAAFPNLLVN GTSGIAVGMA TNMIPHNLGE VVAAARHLVK HPDADLEKLM
EFIPGPDLPT GGMLLGLDEV RKAYETGRGV VRMRATVTTG PLEGSRGRQA ITVTELPYGV
GPEKIIEKIT DEVNKSKRLT GIADVKDLTD RENGIRLVIE CKVGVNPQAL LADLYRLTPL
EQSFGINNLV LVDGQPQTLG LKALLEVFLA HRYEVVTRRT RFRRRKREDR LHLVDGLLKA
LIDIDKVIKL IRRSENAQAA KEGLVSTFAL SETQAAYILD TPLRRLTRFD SVELEGEQER
LRGEIAELST ILDDDKVLRR VVSNELGKVA KDLSAERRTT LLDGDLKEVL AASRTSGPLE
VADDPCQVVL SATGLVARTA AESEEAVEGR KRSGRAKHDA VAATVHTTAR GQVLLVTSRG
RAFKTDVLPL PVLPQGEGTL SLSGGVPVRE LVGLEAGERV VGIAPLGETD SPGLALGTKQ
GVVKVCAPEW PVRSDEFEVI GLKAGDEVVG AQWLADGQEA LVFVSSEASL LRYAASLVRP
QGLRGGGMAG ITLPGEASVV FFGAVRTDDA EHGEPVVVTS TGQSVKVTPF DLYPAKGRAT
GGVRAHRFLK GEDGLVLAWV GARPAAVTES GAAVELPEID PRRDGSGAPH PGPDVIGHLV
ERA
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