Gene Amir_2193 details

Gene Information

• Locus tag: Amir_2193
• ID: 8326382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 2426003
• End bp: 2427949
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644942743
• Product: von Willebrand factor type A
• Protein accession: YP_003099984
• Protein GI: 256376324
• COG category: [R] General function prediction only
• COG ID: [COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGGCT ACCGGTACGG CCGGTACGCC GACGGCCCCG ACCCGCTCGC CCCGCCCGCC 
GACCTGCGCG CCGCCGTCGA CGAGCTGGGC CGCGACATCA TGGAGGGCGC CTCGCCCGAG 
TCGGCGCTGC GCGAGCTGCT GCGGCGCGGC CTGCCCGGCG GGCGCGGGCT GGACGACCTG 
ACGGCCCGGC TGTGGCAGAA GCGGGCCGCG CTCGCCCGCC GCAACCGGCT CGACGGCACC 
CTGCAGGAGG TGCGGCGGCT GCTCGACGAG GCCCTGGAGG CCGAGCGGGC GGCGCTGTTC 
CCCGACCCGG ACGACGACGC CCGGTTCCGC GAGGCCCAGC TCGACGCGCT GCCCACCGGC 
ACCGCCGCCG CAGTGCGCGA GCTGTCCTCG TACGACTGGC GCTCGCCGCG GGCCCGCGAG 
TCCTACGAGC GGATCTCGCA GCTGCTCGGC CGGGAGCTGA TGGACCAGCG GTTCCAGGGC 
ATGAAGCAGG CCATGGGCGG GGTCGGGCAG GCCGACGTCG AGCGCATCCA GGAGATGCTG 
GGCGACCTCA ACGCGCTGCT CGCCGCGCAC GCCTCCGGGC AGGACGTGCG GGAGCGGTTC 
GCCGAGTTCA TGCGGCGGCA CGGCGAGTTC TTCCCGGAGG ACCCGAAGGA CGTGGACGAG 
CTGGTCGACG TGCTGGCCGC CCGGTCCGCC GCCGCGCAGC GCGTCATGAA CTCGATGACC 
GAGGAGCAGC GGGCCGAGCT GTCGGCGCTG AGCCAGCAGG CGTTCGGCGG GTCGCAGGTC 
GGCTCGCAGC TGTCCGCGCT GGACTCGCTG CTGCGCGGGC TGCGGCCCGG CGAGGACTGG 
GACTCCTCGG CCCGGTTCCG GGGCGACAAC CCGCTGGGGC TGGGCGAGGC CGCGCAGGCC 
ATGGCGGACC TCGCGGAGCT GGACCAGCTC GCCGAGCAGC TCTCCCAGTC CTATCCGGGA 
GCCCGGCTGG AGGACATCGA CCTGGACGCG CTCGTGCGCC AGCTCGGGCC CGAGGCCGGG 
GTCGACGCGC GGGCGCTCGC CGAGCTGGAG CGGCTGCTGC GGCAGCAGAA CCTCGTGGAG 
CGCGCCCCCG ACGGCACGCT GCGGCTCACG CCGAAGGCGC TGCGGCAGCT GGGGGAGAGC 
GCGCTGCGCG GCGTGCTCGA CGGGGTGCGG GCGCAGGGGC GGCGCGACAG CCGCCAGGCC 
GGGGCCGCCG GGGAGCTGAC CGGGTCCACC CGGCCGTGGC AGTTCGGCGA CACCGAACCG 
TGGAACACAC CACGCACCGT CACCAACGCG GTGCTGCGCA CGTCCGGTAC GTCACCGGGC 
GGGGCGGTGC GGCTGGACGT GGTCGACGTC GAGGTCAGCG AGACCGAGCA GCGCACGCGG 
GCCGCCGTCG CGCTGTGCGT GGACACCTCC TGGTCGATGG TGCAGGACGG GCGGTGGGTG 
CCGATGAAGC GCACCGCGCT GGCGCTGCAC CACCTGATCA GCACCCGGTT CCGGGGCGAC 
GCGCTGCAGA TCGTCACGTT CGGGCGGCAC GCCGAGGCGG TCGACGTCGG CGAGCTGACC 
GCGCTGGAGG GCGTGTGGGA GCAGGGCACC AACCTGCACC ACGCGCTGCT GCTCGCGGGC 
AGGCACCTGC GCAGGCACCC CGACGCCCAA CCGGTGGTGC TCGTGGTCAC CGACGGTGAG 
CCCACCGCGC ACCTGGAGCA GGACGGCGAG GCGGTGTTCC ACCACCCGCC GCTGGACCGG 
ACGCTGGCCA GGACGGTCGC CGAGGTCGAC GCGCTGAGCG CCCTCGGCGC GTCGCTGACG 
CTGTTCCGGC TGGGGGACGA CCCCCGGCTG ACCGCGTTCA TCGACCGGGT GGCGCGGCGC 
AGCGGCGGCC GGGTGGTCGC GCCGGACGAG GACGGCCTCG GCGCGGCGGT GGTGGGGGAC 
TACCTCAGGT CGCGGCGCAG GCGGTGA 

 

Protein sequence

MSGYRYGRYA DGPDPLAPPA DLRAAVDELG RDIMEGASPE SALRELLRRG LPGGRGLDDL 
TARLWQKRAA LARRNRLDGT LQEVRRLLDE ALEAERAALF PDPDDDARFR EAQLDALPTG 
TAAAVRELSS YDWRSPRARE SYERISQLLG RELMDQRFQG MKQAMGGVGQ ADVERIQEML 
GDLNALLAAH ASGQDVRERF AEFMRRHGEF FPEDPKDVDE LVDVLAARSA AAQRVMNSMT 
EEQRAELSAL SQQAFGGSQV GSQLSALDSL LRGLRPGEDW DSSARFRGDN PLGLGEAAQA 
MADLAELDQL AEQLSQSYPG ARLEDIDLDA LVRQLGPEAG VDARALAELE RLLRQQNLVE 
RAPDGTLRLT PKALRQLGES ALRGVLDGVR AQGRRDSRQA GAAGELTGST RPWQFGDTEP 
WNTPRTVTNA VLRTSGTSPG GAVRLDVVDV EVSETEQRTR AAVALCVDTS WSMVQDGRWV 
PMKRTALALH HLISTRFRGD ALQIVTFGRH AEAVDVGELT ALEGVWEQGT NLHHALLLAG 
RHLRRHPDAQ PVVLVVTDGE PTAHLEQDGE AVFHHPPLDR TLARTVAEVD ALSALGASLT 
LFRLGDDPRL TAFIDRVARR SGGRVVAPDE DGLGAAVVGD YLRSRRRR