Gene Amir_2118 details

Gene Information

• Locus tag: Amir_2118
• ID: 8326307
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 2344146
• End bp: 2344607
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644942668
• Product: thioesterase superfamily protein
• Protein accession: YP_003099909
• Protein GI: 256376249
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGATC CCCGCCCCGC CCACGTGCAC CGCATCCGGG TCCGCCCGGT CGACTGCGAC 
CGGCGGGGCG TGGTGCACGC GTCCCGCTAC CCGATTTTCT TCGAGGCGGC GATGGTGGAG 
ACGGTCAGGT CGATGCTCGG CTCGTACCGG GAGCTGGAGA AGCACGGCGT GGAGTTCGCG 
GTGGCCGAGA CGTCGGTGCG CTACCTGGGC GAGGCGGGCT TCGACGACAT GATGCGCATC 
AACGTACGAG TGCGCACCCT GGGCAGCACG ACGATGACCC TGGGCTTCGA GGCCGAGGTC 
GACGGAACCC CGGTAGCGGT CGGCTGGACC CGCTACACCG CCTGCGGCAC CCCGGAACCC 
AGGCACACCC CGATCCCGGA CGAACTGCGC CGAGCCCTGG AACAACGCAC CCGAACCACC 
CGCAACGGCC ACATCACCAC CACGACCACC AAACGCCCCT AA 

 

Protein sequence

MADPRPAHVH RIRVRPVDCD RRGVVHASRY PIFFEAAMVE TVRSMLGSYR ELEKHGVEFA 
VAETSVRYLG EAGFDDMMRI NVRVRTLGST TMTLGFEAEV DGTPVAVGWT RYTACGTPEP 
RHTPIPDELR RALEQRTRTT RNGHITTTTT KRP