Gene Amir_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2080 
Symbol 
ID8326269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2304064 
End bp2304765 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID644942631 
ProductGntR domain protein 
Protein accessionYP_003099872 
Protein GI256376212 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGC TGACCGACGC GCTGTTCCGC CCGGTGCGGG CGGGCAACGC GTTCGAGGAG 
ACCGTGGAGC GCCTGGTGCA GGCGGTGCGC CTGGGCGTCG TGTCCCCCGG CGACCGCCTG 
CCCGCCGAGC GCGACCTGGC GGCACGGCTC GGGGTGAGCC GGGCGACCCT TCGGGAGGCG 
CTGAAGTCGT TGCAGGACAA CGGCTACGTC GAATCCCGCA GGGGTCGCTA CGGCGGCACC 
TTCATCACCG GCGACCTCCC GAACCCCACC TCCGGGGCGG CGGGCGTCCC GTGGGAGCTG 
ACGGACGCCC TGCTGCTGCG CGCCGCGCTG GAGGCGGGCG CCGCGGAGCT GGCGGCCGGA 
ACCGCGCTGT CCCCGGAACG CCGCCGCGAC CTGCGCGCCC GCCAGGCGGA CTGCGCGGAG 
GCGGGCCTGC CGGACTACCG CCGCAAGGAC TCCAGGCTGC ATTTGGCGAT CGCGGAGGCG 
GCGGGCTCCC CGTCGCTGAC GGCGGCGATC GCGGACGTGA GGATGCGGGT GAACGCCCTG 
CTGGACCGCA TCCCCCTGCT GCCGCCGAAC CTGGCGCACT CGAACGACCA GCACACCCGG 
GTGGTCGACG CGGTCCTGGA CGGCGACCCG GAGGCGGCGA GGCGCGCGAT GGCGGAACAC 
CTGGAGGGAA CGGCGGCCCT GCTGCGAGGC TTCCTGTCCT GA
 
Protein sequence
MIELTDALFR PVRAGNAFEE TVERLVQAVR LGVVSPGDRL PAERDLAARL GVSRATLREA 
LKSLQDNGYV ESRRGRYGGT FITGDLPNPT SGAAGVPWEL TDALLLRAAL EAGAAELAAG 
TALSPERRRD LRARQADCAE AGLPDYRRKD SRLHLAIAEA AGSPSLTAAI ADVRMRVNAL 
LDRIPLLPPN LAHSNDQHTR VVDAVLDGDP EAARRAMAEH LEGTAALLRG FLS