| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2047 |
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| Symbol | |
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| ID | 8326236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2268249 |
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| End bp | 2270828 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644942598 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003099839 |
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| Protein GI | 256376179 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.666145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCCACG TCCCGCACGT CCGCTCCACG GCCCAGTGGC ACGTCCCGTT CCCGTCCGCG
CCGGTGGTCG AGCACCACCG GACACCGCTG GGGATCGGCG AGCCGGAACC GAGGTTGTCG
TGGACCACGG CGGCGGAGGC GGGGTGGGTG CAGCGGGCGT ACGAGGTCGA GGTGGGCGGC
GAGCCGACCG GGTGGGTGGA GTCGGACGGG TCGAGCCTGG TGCCGTGGCC CGCCGGGCCG
CTGGGCTCGC GGGACCGCAG GGAGCTGCGG GTGCGGGTGC GCGGCGACGA GGGGCCACCG
AGCCCGTGGA GCGCGCCGTC GTTCGTGGAG GCCGGGCTGC TGCGGCCCTC GGACTGGGTG
GCACGCATGG TGTCTCCGGT CGCCGGACGC CGCCCTCCCC TGCTGCGGCG GGAGTTCGCG
GTGCGCGCGC CGATCGTGCG GGCCCGGCTG TACACGACCG CGCAAGGCGT GCACGAGGTG
CTGCTCAACG GGTCGCGGGT CGGCGACGAG GTGCTCGCGC CGGGGTGGAC CAGCTACCGG
CGCCGGCTGC GGTACCGGAC GCACGACGTG ACCGGGCTGC TGCGGCACGG GCGCAACGCG
CTCGGGGTGG CGCTGGCGGA CGGCTGGTAC CGGGGCAGGC TCGGGTTCTC CGGGCGGCGC
GCGCTGTACG GGGACCGGCT GGCGGCGCTG GTGCAGCTGG AGGTCGTCGG CGAGGACGGC
TCGCGGCAGG TGGTGGGCAC CGACGAGCGG TGGCGGGCCG GGACCGGCGG GCTGGTGTCG
GCGGGTCTGT ACGACGGGGA GCACTTCGAC GCGCGGCGGC ACCCCGGCGG GTGGGCGGAG
CCGGGGTTCG ACGACTCGGG GTGGGGCGCG GTCGAGGTGG TGGAGCGGGA CCTGGCGACG
CTGGTCGCGC CGACCGGGCC GCCGGTGCGC CGGACCGAGC TGCTGCGGCC GGTGGCGGTG
ACCTCGCTGG GGCGGGGGCG GCACCTGCTG GACTTCGGGC AGAACCTGGT GGGGCGGCTG
CGGTTGCGGG TGGACGAGGG GGCCGCGCGG GAGGTGGTGG TGCGGCACGC GGAGGTGCTG
GAGGACGGCG AGCTGTGCAC GCGGACCCTG CGCGGGGCGC GGGCCACCGA CCGGTACGCG
CCGGGGGCGG GGACGGCGGT GTGGGAGCCG TCGTTCACCT ACCACGGGTT CCGGTACGCG
GAGGTGACCG GGCTGTCGGG GGCGCCGGAC GTGGTGGCGG CGGTGTGCGG CACGGACCTG
CGGCGGACCG GGTGGTTCCG GTGCTCGGAC CCGGATTTGG AGCGGCTGCA CGAGAACGTG
GTGTGGAGCG CGCGGGGGAA CTGGGTGGAC GTGCCGACGG ACTGCCCGCA GCGGGACGAG
CGGCTGGGGT GGACCGGGGA CGTGCAGGTG TTCGCGCCCG CGGCGGCGTT CCTGCACGAC
TGCGCGGGCG CGCTGGTGTC GTGGCTGGCG GACCTGGCGG TGGACCAGGC GGAGGACGGC
ACGGTGCCGC TGGTGGTGCC GTCGGTGCCG CTGGGGTCCG GGGTGGGTGA CGGGCCGGTG
GCGCTGTGGG GTGACGCGGC GGTGCTGGTG CCGTGGGTGC TGTGGGAGCG GTTCGGGGAC
CTGGAGGTGC TGCGGTCGAG CTACCCGAGC GCGCGGGCGT GGGTGGGGCG GGTGGAGCGG
GCGCTGGACG AGGACGGGGT GTGGCGGCGG GGGTTCCAGT TCGGCGACTG GCTGGACCCG
GCCGCGCCGC CGGACCGGCC GCACGAGGCG CGCACCGATC CGGCGGTGGT GGCGACGGCG
TACGCGGCGC GGTCGGCGCG GGTGCTGGCG CAGGTGGCGG ACCTGATCGG CGCTCCAGGG
GACGCCGTGC GGCTGCGCGC GCTGGCGCGG CGGGTGACGG CGGGGTTCGC GCGGGCGTTC
CCGGACCAGG GCGGCACGCA GACCGGGTTG GCGCTGGCGC TGCGGTTCGG GCTGGTGCCC
GCGCGGGAGC GGGCGCGGGT GGCGCGGCGG TTGGCGGGGC TGGTGCGGGC GGAGGGGCAC
CGGGTCGGGA CGGGGTTCGC GGGGACGCCG GTGGTGCTGG ACGCGTTGGC GGACAACGGT
TACCTGGACG ACGCGTACCT GCTGCTGACC CAGCGGGAGT GCCCGTCGTG GCTGTACGCG
GTGGAGCGGG GTGCGACGAC GGTGTGGGAG CGCTGGGACG CGCTGCTGCC GGACGGGCGG
GTGAACCCCG GCGAGATGAC CTCGTTCAAC CACTTCGCGC TGGGCTCGGT GGCGGACTGG
ATGCACCGCG CGGTGGCGGG GTTGGCGCCG GGCGCGCCCG GTTACCGGGT GATCAGGGTG
GCGCCGAGGT TCGGCGGCGG GCTGGTGAGC GCGGAGGCGG AGCACCTGAC GCCGTACGGT
CGGGCGCGCG TGGCGTGGCG GCGCTCGGGC GAACGCGCGG TGGTGGACGT GGTGGCCCCG
ACGGGAACCC GCGCGGTCCT GGACCTGCCG GGCGCGCCAC CGCAGGAGGT GGGGCCGGGG
CGGCACCGGT TCACGGTGCC GTGCCGGGCG GTGCGGGCGG ACGCGGTGCA CGTGTGGTGA
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| Protein sequence | MPHVPHVRST AQWHVPFPSA PVVEHHRTPL GIGEPEPRLS WTTAAEAGWV QRAYEVEVGG
EPTGWVESDG SSLVPWPAGP LGSRDRRELR VRVRGDEGPP SPWSAPSFVE AGLLRPSDWV
ARMVSPVAGR RPPLLRREFA VRAPIVRARL YTTAQGVHEV LLNGSRVGDE VLAPGWTSYR
RRLRYRTHDV TGLLRHGRNA LGVALADGWY RGRLGFSGRR ALYGDRLAAL VQLEVVGEDG
SRQVVGTDER WRAGTGGLVS AGLYDGEHFD ARRHPGGWAE PGFDDSGWGA VEVVERDLAT
LVAPTGPPVR RTELLRPVAV TSLGRGRHLL DFGQNLVGRL RLRVDEGAAR EVVVRHAEVL
EDGELCTRTL RGARATDRYA PGAGTAVWEP SFTYHGFRYA EVTGLSGAPD VVAAVCGTDL
RRTGWFRCSD PDLERLHENV VWSARGNWVD VPTDCPQRDE RLGWTGDVQV FAPAAAFLHD
CAGALVSWLA DLAVDQAEDG TVPLVVPSVP LGSGVGDGPV ALWGDAAVLV PWVLWERFGD
LEVLRSSYPS ARAWVGRVER ALDEDGVWRR GFQFGDWLDP AAPPDRPHEA RTDPAVVATA
YAARSARVLA QVADLIGAPG DAVRLRALAR RVTAGFARAF PDQGGTQTGL ALALRFGLVP
ARERARVARR LAGLVRAEGH RVGTGFAGTP VVLDALADNG YLDDAYLLLT QRECPSWLYA
VERGATTVWE RWDALLPDGR VNPGEMTSFN HFALGSVADW MHRAVAGLAP GAPGYRVIRV
APRFGGGLVS AEAEHLTPYG RARVAWRRSG ERAVVDVVAP TGTRAVLDLP GAPPQEVGPG
RHRFTVPCRA VRADAVHVW
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