Gene Amir_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2004 
Symbol 
ID8326189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2220429 
End bp2221010 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content76% 
IMG OID644942553 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003099798 
Protein GI256376138 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.028996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTCCG GTGGTGGGGG CGCGGGGCGG GCCAAGCGGG CCGACGCCCG GCGCAACCAG 
GAGGCGCTGC TCGACGCGGC CGCGGCGGTG TTCGTGACGT CCGGGGTGGA GGCCCCGGTG 
CGGGACATCG CGGCCAGGGC CGGGGTGGGC GTGGGGACCA TCTACCGGCA CTTCCCGACC 
CGCGCGGACC TGGTGATCGC GGTGTTCCGG CACCAGGTGG ACGCCTGCGC CGAGGCCGGG 
CCCGCGCTGC TGACCTGCTG CGCGTCGCCG CACGAGGCGC TGCGGCGGTG GGCCGACCTG 
TTCGTGGACT TCCTGGTGAC CAAGCACGGC CTGGCGTCGG CGATGCGGTC CGACGACGAG 
GGGTTCCAGG CGCTGCACGC GCACTTCCTG GAGCGGCTGC TGCCGGTGTT CGAGCGGCTG 
CTGTCGGCGG CGGAGGCGGC GGGCGAGGTG CGGGAGGGCG TGGTGGCGCA GGAGGTGCTG 
TTCGCCATCG GCAACCTGTG CATCGGCGCC GACCTGGACC CGTCGTACGA CGCCCGGCGC 
GTGGTGGGGT TCCTGGTCGA CGGGCTGCGC GCCGCCGGGT GA
 
Protein sequence
MESGGGGAGR AKRADARRNQ EALLDAAAAV FVTSGVEAPV RDIAARAGVG VGTIYRHFPT 
RADLVIAVFR HQVDACAEAG PALLTCCASP HEALRRWADL FVDFLVTKHG LASAMRSDDE 
GFQALHAHFL ERLLPVFERL LSAAEAAGEV REGVVAQEVL FAIGNLCIGA DLDPSYDARR 
VVGFLVDGLR AAG