Gene Amir_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1952 
Symbol 
ID8326137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2160337 
End bp2161062 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content76% 
IMG OID644942501 
Productregulatory protein TetR 
Protein accessionYP_003099746 
Protein GI256376086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACAC CGCAGCAGCG CCGCGCCGCC CGCAACCAGC TCCCCGGCGG TGAGGCCGCC 
GCCGGGCGCG GGGCGGCGCG CAAGGCCCCG ATCACCGTGG ACGCGATCGT CGACACCGCC 
TTCGGCATCG TCGAGCGCGA GGGCTACGAG GCGCTGACCA TGCGCCGGGT CGCCGCCGCG 
CTGGGCACGG GCGCGTCGTC GCTGTACGCG CACGTGGTCA ACAAGGAGGA CCTGGACGAG 
CTGCTCATCG GCCGCCTGTG CGCGCGGGTC CCGCTGCCCG AGCCCGACCC GGCGGCGTGG 
CGGGCGCAGC TGACCGGCGT CTGCGCCGCG CTGCGGGACG AGTACCTGAG CTACCCCGGA 
ATCTCCCGTG CCGCGCTCGC CGCCGCGCCG TCCAACCTGG ACACGCTGCG GGTGAGCGAG 
GGGATGCTCG CGATCGCGCT CGCCGGGGGC GCCCCGCCGC AGGCCGCCGC GTGGGCGGTC 
GACGCGCTGA CCCTGTACGT CAACGCCTAC AGCCTGGAGC GCTCGCTGGC CGCGCGCCGC 
ATCGCAGGCG GCGAGGACTG GGTGATCAGC CGGGAGGAGA TGGCGCGGCG CTTCGCGGAG 
CTGCCGGACG CCTTCCCGGT GTCCAAGCGG CACGCGGCCG AGCTGACCGC GGGCACCGGG 
CACGACCGGT TCGACTTCAC GGTCGCGCTG CTGCTCGACG GCCTGGAGCG CGCCGCGGGC 
GACTAG
 
Protein sequence
MPTPQQRRAA RNQLPGGEAA AGRGAARKAP ITVDAIVDTA FGIVEREGYE ALTMRRVAAA 
LGTGASSLYA HVVNKEDLDE LLIGRLCARV PLPEPDPAAW RAQLTGVCAA LRDEYLSYPG 
ISRAALAAAP SNLDTLRVSE GMLAIALAGG APPQAAAWAV DALTLYVNAY SLERSLAARR 
IAGGEDWVIS REEMARRFAE LPDAFPVSKR HAAELTAGTG HDRFDFTVAL LLDGLERAAG 
D