| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1948 |
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| Symbol | |
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| ID | 8326133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2157127 |
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| End bp | 2158161 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644942497 |
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| Product | ABC transporter related |
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| Protein accession | YP_003099742 |
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| Protein GI | 256376082 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.200483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGG ACGCGCGGCT GGTGGTCAGC CTGGGCGGGT TCGAGCTGGA CGCGGCGCTG
CGGATCGAGC GCGGCGAGGT CGTGGCGCTG CTCGGGCCCA ACGGGGCGGG CAAGTCGACG
GCGCTGCGCG CGCTGGCCGG GCTGGTGCCG CTGGCCGGCG GGCACGTGCG GGTCGACGGG
GACGCCTGGG ACCGGTTGCC GGTGGAGCGG CGGCCGGTGG GCGTGGTGTT CCAGGACTAC
CTGCTGTTCC GGCACATGTC GGCGCTGGAG AACGTGGCGT TCGGGTTGCG CTCGCGAGGG
GTGCGCAAGG CCGAGGCGCG GGCGACGGCG CTGGGCTGGC TGGAGCGGGT CGGGCTGGGC
GAGCACGCGG CGGCCCGGCC GGGCGCGCTG TCCGGCGGGC AGGCGCAGCG GGTCGCGCTG
GCGCGGGCGC TGGCGACCTC GCCGGGGCTG CTGCTGCTGG ACGAGCCGAT GGCGGCCATG
GACGCCGGGA CACGGCTGCG GGTGCGCGCC GACCTCGGCG AGCACCTCGG CGGGTTCCGG
GGCCGGACGC TGCTGGTGAC GCACGACCCG CTGGACGCGA TGGTGCTGGC CGACCGGCTG
GTGGTGCTGG AGGCGGGCCG GGTGGTGCAG GAGGGGGCGC CCGAGGAGGT GGCGGCCCGG
CCGCGCACGG ACTACGTGGC GGCGCTGGTC GGGCTGAACC TGCTCAGGGG GACGGCGCGC
GGCGACTCGG TCGAGCTGGA CGGCGGCGGG GTGGTCGCGA TCGGCGAGGA GCTGCGCGGC
GAGGTGTTCG TGGCGTTCGC GCCTGGCTCG GTGGGGCTGT ACGGGGAGCG GCCGGAGGAC
GGGCCGCGCA ACGCCTGGCC GGTGCGGGTG GTCGGGCTGG AGCAGCAGGG GCACTCGACG
CGGGTGCGGC TGGACGGGGT GGTGCCGGTG GTCGCCGAGG TGACCGCGTC GGTGGTGGCG
TCGCTGCGGC TGCGGCCGGG CGACGAGCTG TGGGCGGCGG TGTCGGCGGC GGAGGTCGTC
GCGTACCCGG CGTGA
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| Protein sequence | MTLDARLVVS LGGFELDAAL RIERGEVVAL LGPNGAGKST ALRALAGLVP LAGGHVRVDG
DAWDRLPVER RPVGVVFQDY LLFRHMSALE NVAFGLRSRG VRKAEARATA LGWLERVGLG
EHAAARPGAL SGGQAQRVAL ARALATSPGL LLLDEPMAAM DAGTRLRVRA DLGEHLGGFR
GRTLLVTHDP LDAMVLADRL VVLEAGRVVQ EGAPEEVAAR PRTDYVAALV GLNLLRGTAR
GDSVELDGGG VVAIGEELRG EVFVAFAPGS VGLYGERPED GPRNAWPVRV VGLEQQGHST
RVRLDGVVPV VAEVTASVVA SLRLRPGDEL WAAVSAAEVV AYPA
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