Gene Amir_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1939 
Symbol 
ID8326124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2150955 
End bp2151683 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content73% 
IMG OID644942488 
ProductABC-2 type transporter 
Protein accessionYP_003099733 
Protein GI256376073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGC GTTTCCTCGT GCTCGAACTG CTCCGCGCCA CCCGCACCCG CCGCTACCTG 
GTGGCCACCA TGCCGCTGCC CTCCCTGATG CTCCTGGTGC TCCCGGACAT CTACAACGTG 
GAGGGCGGCA CCCTCGGCGG CGTGCCCATC GCGATCTCGC TGATGCTCAA CATGGCCATG 
TTCGGCGTCA TCTCCGCCCC CGTGACGACC GGCGCGAGCA TCGCCGTCGA GCGCGGCGCG 
GGCTGGCAGC GGCAGCTGCG GCTGACCCCG CTCACCGGCG CGGGCTACGT GGTCGGCAAG 
GGCGTGGTCG GGATGCTGCT GGCCCTGCCT CCGCTGCTGC TGCTCGGCCT GGTCGGGGCG 
TTCACGCAGG ACGTGCGCCT GACGGCGGGC CAGTGGCTGG TCTCGCTCGG CGCGGTGTGG 
CTGACCGGGT TGCCGTTCGT GCTGCTCGGG ATCGTGCTCG GCCTGGTGGT CTCGCCGGGC 
GCGATGCAGG CGGTGACCGG GGTGGCGTCG CTGGTGCTGG GCGTGGCGGG CGGCGTGCTG 
ATCCCCGTGG AGCTGGCCCC GGACTGGCTG CGCCGGATCG TGCTGACCCT GCCGATGCAC 
TGGGGCAAGC AGCTCGCGCT GTCGCCGCTG GTGGACGTGG AGGTGGGGCG GGCGCTGTTC 
GTGCTCGGCG TGTGGGTGGT GGGTCTCGGC TTGATCGCCG CCCGCCGGTT CCGCGCGGCC 
GAGGCGTAG
 
Protein sequence
MNTRFLVLEL LRATRTRRYL VATMPLPSLM LLVLPDIYNV EGGTLGGVPI AISLMLNMAM 
FGVISAPVTT GASIAVERGA GWQRQLRLTP LTGAGYVVGK GVVGMLLALP PLLLLGLVGA 
FTQDVRLTAG QWLVSLGAVW LTGLPFVLLG IVLGLVVSPG AMQAVTGVAS LVLGVAGGVL 
IPVELAPDWL RRIVLTLPMH WGKQLALSPL VDVEVGRALF VLGVWVVGLG LIAARRFRAA 
EA