Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1935 |
Symbol | |
ID | 8326120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2148302 |
End bp | 2148736 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942484 |
Product | UspA domain protein |
Protein accession | YP_003099729 |
Protein GI | 256376069 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.3004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAACA GGATCGTCGT CGGGGTGGAC GGGTCGCCCG CCAGCGCGGA CGCGCTGCGG TGGGCGGTGG AGGAGGCCGG GCAGCGGGGG TGCTCGGTCG ACGCGGTCAT CGTGTGGCAG ATCGACCCCG GCATGGTGCT CGGGCCGGTC AGCGGCGCGG AGGCGCTCGC CATCGACCCG GAGACCACCC GCGAGGGCTA CATGCGGTTG CTGGAGTCGA TGGTCGCGCA GTTCGACGTG AACAAGGTGT TCATGGAGGG CGAGCCCGGC CGGGTGCTGG TGGAGGTGTC CAAGGACGCG GACCTGCTGG TGGTCGGCAG CCGGGGGCGC GGACTGCTGC GGGAGGCGCT CACCGGGTCG GTCAGCTCGT ACTGCGTGCA CCACGCGGAG TGCCCGGTGG TGGTCTTGCG CGAGCGCGAG CCCGCGCACG CGTGA
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Protein sequence | MGNRIVVGVD GSPASADALR WAVEEAGQRG CSVDAVIVWQ IDPGMVLGPV SGAEALAIDP ETTREGYMRL LESMVAQFDV NKVFMEGEPG RVLVEVSKDA DLLVVGSRGR GLLREALTGS VSSYCVHHAE CPVVVLRERE PAHA
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