Gene Amir_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1923 
Symbol 
ID8326108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2134527 
End bp2135327 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content75% 
IMG OID644942472 
Productglycosyl transferase family 2 
Protein accessionYP_003099717 
Protein GI256376057 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGA ACGCGACCGA GCCGGTGGAC CTCGGGAACG GCGCCCTGGT GCTGGACGTG 
GTGGTCCCGG TGTACAACGA GGAGAGCGCG CTGGAGCCCG GCGTGCGCAG GCTGCACGCC
TACCTCGGCG CCACCCTGCC CTTCGCGTTC CGGATCACGG TCGCCGACAA CGCCAGCACC
GACCGCACCC CCGACGTCGC CGCCCGGCTG GGGCGCGAGC TGGACGGCGT GCGGGTGCTG
CGGCTGGCCG AGAAGGGCCG GGGCCGCGCG CTCAAGACCG CCTGGCTGGG CTCCGAGGCC
GCCGTGGTCG CCTACATGGA CGTGGACCTG TCCACCGACC TGGCCGCGCT GCCCGCCCTG
ATCGCCCCGC TGGTGTCCGG GCACTCCGAC GTCGCCATCG GCAGCAGGCT CGCGCGGGGC
GCCCGCGTGG TGCGCGGCCC CAAGCGCGAG TTCATCTCCC GCGCCTACAA CGTCATCCTC
AAGCTGGCCC TGCGCGCCCG GTTCACCGAC GCGCAGTGCG GCTTCAAGGC GATGCGCTCG
GACGTCGCCG CCCGGCTGCT GCCGCTGGTG CAGGACACCG GCTGGTTCTT CGACACCGAG
CTGCTCGTGC TGGCCCAGCG GTCCGGGCTG CGCACCCACG AGGTCGCCGT CGACTGGGTG
GACGACCCGG ACTCGTCCGT GGACATCGTC GCCACCGCCG TGGCCGACCT CAAGGGCGTC
GCGCGGCTGT GGCGCACCCG CCTCGCGCTC CCGGCCGACC TGAGGCGGGC CCCGGCCCGC
GACCTGGTCC GCGCCGCCTG A
 
Protein sequence
MTTNATEPVD LGNGALVLDV VVPVYNEESA LEPGVRRLHA YLGATLPFAF RITVADNAST 
DRTPDVAARL GRELDGVRVL RLAEKGRGRA LKTAWLGSEA AVVAYMDVDL STDLAALPAL
IAPLVSGHSD VAIGSRLARG ARVVRGPKRE FISRAYNVIL KLALRARFTD AQCGFKAMRS
DVAARLLPLV QDTGWFFDTE LLVLAQRSGL RTHEVAVDWV DDPDSSVDIV ATAVADLKGV
ARLWRTRLAL PADLRRAPAR DLVRAA