| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1913 |
|---|
| Symbol | |
|---|
| ID | 8326098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2120378 |
|---|
| End bp | 2122936 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644942462 |
|---|
| Product | CoA-binding domain protein |
|---|
| Protein accession | YP_003099707 |
|---|
| Protein GI | 256376047 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGC ACATCGAGAC CCGCGCCCTG CTCTCCGACG GCACCGTCAT CGCGCTGCGC
GAGGCGAGCC CCGAGGACGC CGACGCACTG CGCGAGCTCC GCCGAGAACT GCCCGACCGC
TACCCCCTCG CCGAGGACGA CGTCGTGCTC TGCGCGTTCT CCGACGACGC GCTCATCGGC
GCGGGCTCCT ACGCGCCCTC CACCGACGAC GAGACCACCG CCAACGTGGT GCTGGTCGTC
ACCTCGGCGA ACCAGTCCCG AGGCGTCGGG ACCCTGCTGC TGGAGCACCT GGTCTCGCTC
GCGCGGGGCC GGGGCGTGCG CCGGTTCACC GCCGACCTGC TCAGCAACAA CCCGAGGATG
CTCGGGCTGT TCAGCGAGCT GGGCTTGGTC ATGACCGCCA CCCCGGACAC CGAGGTGGTG
CGCGTCGACC TCGGCCTGGA CGCGGGCGAG GACTACCTGG ACGCGGTCGC CAACCGCGAG
CTGACCTCCG GCGTGGCGAG CCTGCGGGCG GTGCTCAAAC CCACCTCCGC GGTCGTCATC
GGCGCGGGCC GCAACGCCAC CTCGGTCGGC CACGCGGTGC TGGCGAACCT GGTCAAGGGC
GAGTTCGCGG GCGACCTGTA CGCGGTCAAC CCGAAGGCCG CCGAGCTGCT CGGCGTCACC
TGCTACCCGT CGGTGGCCGA GCTGCCCGTC GCCCCCGACC TGGCCGTGAT CTGCGTGCCC
GCCGCCGCGG TGCCCGCCGT GGCCGAGGAC TGCGGCAAGC GCGGCGTCAA GGCCATGGTG
GTCGTCACCT CCGGCGTCGA CCCGAAGCCG CTGCTCGCGT CCGTGCACAA GCACGGGATG
CGCATGGTCG GCCCGAACTG CATCGGCGTC GCCTCCACCG ACCCCGAGGT GCGGATGGAC
GCCACGTTCA CCCGCAAGGG CTCGGGCGGC GGCGGCATCG GCCTGGTGAC CCAGTCCGGC
GGCGTGGCCA TCGCGGTGCT GGAGCAGCTG AGCGCGCTCG GCATGGGCAC CACCGACGTG
GTCTCCACCG GCGACAAGTA CGACGTGAGC GGCAACGACC TGCTGCTGTG GTGGGAGCGC
GACGAGCGCA CCACCTCGGT GGTGCTGTAC CTGGAGTCGT TCGGCAACCC GCGCAAGTTC
TCCCGGCTGG CCCGCAGGGT CGCCAGGCGC AAGCCGGTGC TGGCGATCCG GTCCGCCACC
AGCGAGGCCG GTCAGCGCGC CGCAGCCTCG CACACCGCGT CCACCGCGAC CCCCGCGGTC
ACCCAGGAGG CCCTGTTCCG GCAGGCAGGC GTGATCGTGG TCGACGGCAT CGCCGAGCTC
GTGGAGGTGC TGGCGGCGCT GGAGCACACC CCGCTGCCGC AGGGCCGCTC GGTCGCGGTG
GTCAGCAACG CCGGCGGTCT CGGCGTGCTC GCCGCCGACG CCTGCTCGCA CAACGGGCTG
ACCGTCGCCG ACCTGTCCGA GGACACCACG GCGAAGCTCG CCGCGCTGCT GCCCTCGGTG
GCCAGCACGA CCAACCCGGT CGACACCACC GCCGTGCTCG ACGCCGACGT GTTCGCGCAG
TGCGTGGACG TCGTGGCCGC CGACCCGGCC GTGGACGCGG TCATCGCGGT CACCGTGCCC
ACCGCGCTGG GCAACCCGGC CGAGGGCATC CGCACCAGCA GCAAGCCGGT GCTCGCGGTC
GCCGCCGACC AGCTCGGCTC GGTCGCGATC CTGGAGAACG GCATCGCCTC CTACGCCGAC
CCGGTGCGCG CCGCCGAGTC GCTGGCCGCG CTGGTGCAGC GCGCCGAGTG GCTGCGCAGG
CCCGCGCCCG CCGTGGTCGA CCTGCCCGGC ATCGACGTGC CGCTGGCCCG CAAGGTCGTG
GCCGAGCACT TCGCGGTCGA GCCCGAGGGC GGCTGGCTGG AGCCCGACCA GGTGGTGCGG
CTGCTGAGCG CGTTCGGCCT GCCGATCCTG GGCGGCGTGC TGGCCTCCGA CGTGGAGGGC
GCGGTCGCGG CGCAGAAGTC GTTCGGGCAG CCGATCGCGA TGAAGGCGGT GGCGCGCGGC
GTCCTGCACA AGAGCAAGGC CGGTGGCGTC AAGCTGAACC TGGGCACCCC GGAGCGGGTC
GCCGAGGAGT TCACCGGGAT GCAGGAGCGC TTCGGCGACC GGTTGCAGGG CGTGTTCGTC
CAGCCGATGG CCGAGAGCGG TCGCGAGCTG CTCGTGGGCG TGGTGAGCGA CCAGCGCTTC
GGGCCGCTCG TGGTGACCGG CCTCGGCGGC GTGGACACCG ACCTGCTGGA CGACCGGGCC
GCCGCGCTCG CGCCGCTGAC CTCGGCGGAC GTGGACGACC TCTTGCGCGG CTTCCGCGCC
TCCGCCAAGG TGTTCGAGCA GCACCCGGAG GAGCCGGTGC ACGACGTGCT GCTGCGCGTG
TCGCGGCTGG CGGAGATGGT GCCGGAGATC GCCGAGCTTG ACCTCAACCC CTTGGTGGTC
AAGGGGGAGC GGGTCATCGC CGTGGACGCG CGGGTCCGCT TGGAACCCGT CGCCCCGGTC
GACCCGTACC TGCGAGCGTT GCGGAGGGCC GGGGCGTGA
|
|---|
| Protein sequence | MTTHIETRAL LSDGTVIALR EASPEDADAL RELRRELPDR YPLAEDDVVL CAFSDDALIG
AGSYAPSTDD ETTANVVLVV TSANQSRGVG TLLLEHLVSL ARGRGVRRFT ADLLSNNPRM
LGLFSELGLV MTATPDTEVV RVDLGLDAGE DYLDAVANRE LTSGVASLRA VLKPTSAVVI
GAGRNATSVG HAVLANLVKG EFAGDLYAVN PKAAELLGVT CYPSVAELPV APDLAVICVP
AAAVPAVAED CGKRGVKAMV VVTSGVDPKP LLASVHKHGM RMVGPNCIGV ASTDPEVRMD
ATFTRKGSGG GGIGLVTQSG GVAIAVLEQL SALGMGTTDV VSTGDKYDVS GNDLLLWWER
DERTTSVVLY LESFGNPRKF SRLARRVARR KPVLAIRSAT SEAGQRAAAS HTASTATPAV
TQEALFRQAG VIVVDGIAEL VEVLAALEHT PLPQGRSVAV VSNAGGLGVL AADACSHNGL
TVADLSEDTT AKLAALLPSV ASTTNPVDTT AVLDADVFAQ CVDVVAADPA VDAVIAVTVP
TALGNPAEGI RTSSKPVLAV AADQLGSVAI LENGIASYAD PVRAAESLAA LVQRAEWLRR
PAPAVVDLPG IDVPLARKVV AEHFAVEPEG GWLEPDQVVR LLSAFGLPIL GGVLASDVEG
AVAAQKSFGQ PIAMKAVARG VLHKSKAGGV KLNLGTPERV AEEFTGMQER FGDRLQGVFV
QPMAESGREL LVGVVSDQRF GPLVVTGLGG VDTDLLDDRA AALAPLTSAD VDDLLRGFRA
SAKVFEQHPE EPVHDVLLRV SRLAEMVPEI AELDLNPLVV KGERVIAVDA RVRLEPVAPV
DPYLRALRRA GA
|
|---|
| |