| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1868 |
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| Symbol | |
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| ID | 8326053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2062832 |
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| End bp | 2065066 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942417 |
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| Product | cellulose-binding family II |
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| Protein accession | YP_003099662 |
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| Protein GI | 256376002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCACCA ACTCGTTCCG CGCGCGGTTG GGCGCGGCCG TCGCCGCCGC CACCGCGCTG
AGCGGCGGAC TGGTCGTCGT GGGCACGGCT TCGGCCGCCC CAGCCTGCAA GGTCGACTAC
ACCGTGCAGA ACCAGTGGCA GGGCGGCTTC TCCGCCAACG TCACCGTCAC CAACCTCGGC
GACCCCGTCG ACGGGTGGTC CCTCGCCTGG ACCGCCGCCT CCGGCGAGAA GGTCGACCAG
GGGTGGAACG CGGCGTTCTC CTCCTCGGGC ACGTCGATCA CCGCGTCCAA CGTGGACTGG
AACAGGGCCA TCCCCACCGG TGGCTCGGTC TCGTTCGGGT TCAACGGTTC CCGGACCGGC
GAGCCGGTCG TCCCGTCGAG CTTCGCGCTC AACGGCACCA CGTGCACCGG CGGCGTCGCG
CCCACCACGA CCACCACCCC CGGCGGCCCC ACCACCACGA CCGGGCCGAC CACCACGACC
ACCGGCGGCG GCACCGCGCC GCTGCCCGAC CCGACCGGGC GCAAGCAGGT CGAGCGGCTC
GACCGCGGCC TGATCAGCGT CCGCTCCGGC AGCGGCAACC TGGTCAGCTG GCGGCTCCTG
GGCGGCGACC CGCAGAACGT GGCGTTCACC GTCTACCGGG GCGGCGCCAA GCTCACCGCC
TCGCCGATCA CCGGGTCCAC GAACTACCTG GACAGCGGCG CGCCGGCCGA CGCCTCCTAC
ACGGTCCGCG CGGTGGTCAA CGGCGTCGAG CAGCCCGCGT CCCCGGCCTC GCTGGCCTTC
GGCAACGGCT ACCGGGACGT GCCGATCCAG CCCCCGTCCG GCTCCTACGC CGCGAACGAC
GCGAGCGTCG GCGACCTGGA CGGCGACGGG GTCTACGAGT TCGTCCTCAA GTGGGAGCCC
AACAACGCCA AGGACAACTC CCAGTCCGGC GTCACCGACG TGGTCTACGT CGACGCCTAC
AAGCTCAACG GCGCCAGGCT GTGGCGCGTC AACCTGGGCC GCAACATCCG GGCGGGCGCG
CACTACACCC AGTTCCAGGT CTACGACTAC GACGGCGACG GCAAGGCCGA GGTGGCCATG
AAGACCGCCG ACGCCACCGT GGACGGGCGC GGCACGGTGA TCGGCAACGC CTCCGCCGAC
CACCGCAACT CCTCCGGCTA CGTGCTGGCG GGCCCCGAGT ACCTGACCAT GTTCAACGGC
CAGACCGGCG CCGCGATGTC CACGGTCGAC TACGACCCGC CGCGCGGCAC CGTCGCCGAC
TGGGGCGATA ACTACGGCAA CCGGGTCGAC CGGTTCCTCG CCGGGACCGC CTACCTGGAC
GGCGCACGCC CCTCGCTGAT CATGGCTCGT GGGTACTACA CCCGCGCGGT GATCGCGGCC
TGGGACTTCC GCAACGGGGC GCTCACCAAG CGCTGGGTCT TCGACTCCAA GGCCTCCGGC
AACAGCGGCT ACGCGGGGCA GGGCAACCAC TCGCTCACCA TCGGCGACGT CGACGCGGAC
GGCCGGGACG AGATCGTCTA CGGCGCGGCG GCCGTCGACG ACAGCGGCAA GGGCCTGTGG
AACACCGGGC TCGGGCACGG GGACGCCGCG CACCTGGGCG ACCTCGACCC GTCGCGGGCG
GGCCTGGAGT ACTTCAAGGT CGACGAGGAC ACCTCCAAGC CCGGCTCGTT CTTCGCCGAC
GCCCGCACCG GTTCCCGCGT GTGGACCACG GCGTCCGGCG GCGACAACGG GCGCGGCGTC
GCGGGCGACA TCTGGGCGGG CAGCCCCGGA GCCGAGGCGT GGTCGGCGCG GGACGCGAAC
CTGCGCAGCG CCAAGGGCGC GGAGATCGGG CGCAAGCCCG GCTCCATCAA CTTCCTGGCC
TGGTGGGACG GCGACCCGGT GCGGGAGCTG GTGGACCAGA CCCGGATCGA CAAGTACGGC
ACCGGCGGCG ACACCCGCCT GCTGACCGCC TCCGACGTGC ACAGCAACAA CGGCACCAAG
GCCACCCCGT CGCTGTCCGG CGACCTGTTC GGCGACTGGC GCGAGGAGGT GGTGTGGCCC
ACCACGAACA ACACCGCGCT GCGGATCCAC TCCACCCCGC ACCAGACCGA CCGGCGCATC
CCGACCCTGA TGCACGACAC CATGTACCGG GTCGCGATCG CCTGGCAGAA CACGGCCTAC
AACCAGCCGC CGCACCCGAG CTTCTTCATC GGCGACGGCA TGGCCACCCC GCCCTGGCCG
GACGTCCACT ACTGA
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| Protein sequence | MLTNSFRARL GAAVAAATAL SGGLVVVGTA SAAPACKVDY TVQNQWQGGF SANVTVTNLG
DPVDGWSLAW TAASGEKVDQ GWNAAFSSSG TSITASNVDW NRAIPTGGSV SFGFNGSRTG
EPVVPSSFAL NGTTCTGGVA PTTTTTPGGP TTTTGPTTTT TGGGTAPLPD PTGRKQVERL
DRGLISVRSG SGNLVSWRLL GGDPQNVAFT VYRGGAKLTA SPITGSTNYL DSGAPADASY
TVRAVVNGVE QPASPASLAF GNGYRDVPIQ PPSGSYAAND ASVGDLDGDG VYEFVLKWEP
NNAKDNSQSG VTDVVYVDAY KLNGARLWRV NLGRNIRAGA HYTQFQVYDY DGDGKAEVAM
KTADATVDGR GTVIGNASAD HRNSSGYVLA GPEYLTMFNG QTGAAMSTVD YDPPRGTVAD
WGDNYGNRVD RFLAGTAYLD GARPSLIMAR GYYTRAVIAA WDFRNGALTK RWVFDSKASG
NSGYAGQGNH SLTIGDVDAD GRDEIVYGAA AVDDSGKGLW NTGLGHGDAA HLGDLDPSRA
GLEYFKVDED TSKPGSFFAD ARTGSRVWTT ASGGDNGRGV AGDIWAGSPG AEAWSARDAN
LRSAKGAEIG RKPGSINFLA WWDGDPVREL VDQTRIDKYG TGGDTRLLTA SDVHSNNGTK
ATPSLSGDLF GDWREEVVWP TTNNTALRIH STPHQTDRRI PTLMHDTMYR VAIAWQNTAY
NQPPHPSFFI GDGMATPPWP DVHY
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