| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1850 |
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| Symbol | |
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| ID | 8326035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2036186 |
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| End bp | 2037676 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942399 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003099644 |
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| Protein GI | 256375984 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.834953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACTCA TCGCGCAGTG CTGCGCGGCG GTCATGACCG CCGCGTTGAT CACGCTGCCT
GCGGCAGCGG CACAGGCTGA ACCAGCCGCC ACTCCGGACT CGGCCACCCT GCCCGAGGCC
CTGAAGCGCG ACCTGGACAT CACGCCCGCC GAGGCCACGG CGCGGCAGCA GAAGGAGCAG
GCGGGCGTGC CCGTCGCGGA GGAGCTGCGG ACCGAGCTGG ACGGGCGGTT CGGCGGGTCC
TGGTTCGACA AGGGCAAGCT CAAGGTCGGC GTCACGGACG ACGCGGCGGC CAAGGCCGTG
CGTGACAAGG GGGCCGAGCC GGTCCCCGTC GCGCGCAGCG AGAAGGCGTT GGACGACACC
AAGTCCGCGC TCGACGGCGC CCGGAACGGC ACCGAGGCGG TGCACTCCTG GTACGTCGAC
CCGACCAGCA ACACGGTGGT CGTGACCGCC GCCTCCGAGC AGGCCGGGCG CGAGTTCGCG
GCCAAGGCCG GCGTCGAGGG CTCGGTCCGG GTCACCACGG GGCACGAGAT GAAGCCGGCG
CACGACCTGC GCGGCGGCGA CCAGTACGTC ATCAACGGCA ACACGCTGTG CTCGGTGGGC
TTTCCCGTGA ACGGCGGGTT CGTCACCGCC GGTCACTGCG GTGGCACGGG CAGCACCACC
AAGGGCTTCA ACAACGTCAA CCAGGGCACG TTCGCGGGTT CCTCGTTCCC CGGCCAGGAC
TACGCCTGGG TGCGCACGAA CGGTGACTGG GCCTCCAAGC CCTGGGTCAA CAACTACTCC
GGCGGCAACG TCGTGGTGGC GGGCAGCCAG GAGGCGGGTG TCGGCGCGAC GATCTGCCGC
TCCGGCCGCA CGACCGGCTG GCGCTGCGGC ACCATCCAGG CCAAGAACGT CACGGTGAAC
TACGGCGGCC GGATCGTGAA CGGCCTCGTG TCGACCACGG CGTGCGCCGA GGGCGGCGAC
TCCGGTGGCG CGGTGCTCTC CGGCAACCAG GCCCAGGGCG TCACCTCGGG CGCGGGCGGC
AACTGCTCCA ACGGTGGCAC CAGCGTCTAC CAGCCGCTCA AGCCGATCCT GTCGGCCTAC
GGGCTCACGC TGACGACCAA CGGCGGCGGC GGGTCCGGCA CGAAGATCAT CGGGCACCAG
AACCGCTGCG TCGACGTGCC GAACTCCAAC GCCAAGGACG GCCAGCGGCT CCAGGTCTGG
GACTGCAACG GCACCAACGC GCAGAACTGG ACCTTCGCCG GTGACGGCAC CGTGCGCGCG
TTCGGCATGT GCATGGACGT GGCGTGGGGC TCGCGCGACA ACGGCGCGGC GATCCAGCTC
GCCACCTGCT CGGGCAACCC GGCGCAGCAG TTCGTGCTCA GCGGCGCGGG CGATCTGGTG
AACCCGCAGG CCAACAAGTG CGTGGACATC ACCGGTTCCT GGGGCTCCGG CTCGGCGCTC
CAGCAGTGGG AGTGCACCGG CAAGTCGAAC CAGAAGTGGC GCAAGGGATA A
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| Protein sequence | MRLIAQCCAA VMTAALITLP AAAAQAEPAA TPDSATLPEA LKRDLDITPA EATARQQKEQ
AGVPVAEELR TELDGRFGGS WFDKGKLKVG VTDDAAAKAV RDKGAEPVPV ARSEKALDDT
KSALDGARNG TEAVHSWYVD PTSNTVVVTA ASEQAGREFA AKAGVEGSVR VTTGHEMKPA
HDLRGGDQYV INGNTLCSVG FPVNGGFVTA GHCGGTGSTT KGFNNVNQGT FAGSSFPGQD
YAWVRTNGDW ASKPWVNNYS GGNVVVAGSQ EAGVGATICR SGRTTGWRCG TIQAKNVTVN
YGGRIVNGLV STTACAEGGD SGGAVLSGNQ AQGVTSGAGG NCSNGGTSVY QPLKPILSAY
GLTLTTNGGG GSGTKIIGHQ NRCVDVPNSN AKDGQRLQVW DCNGTNAQNW TFAGDGTVRA
FGMCMDVAWG SRDNGAAIQL ATCSGNPAQQ FVLSGAGDLV NPQANKCVDI TGSWGSGSAL
QQWECTGKSN QKWRKG
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