| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1848 |
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| Symbol | |
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| ID | 8326033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2033980 |
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| End bp | 2034933 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942397 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_003099642 |
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| Protein GI | 256375982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.233654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAGA AGTCAACCCG CGTGCACTGG CGCACCGGGC TCGTCGCCGC CGCCGTCGTG
CTGGCGGGCG CGTCCGTCGC CGCCCCCAGC GCCGGCGCGG CCTCGTTCAA CCTCGAGGGT
TGGGCGACGC AGGGCGGCGG CACCACCGGT GGAGGCAGCG CCTCCCCGAC GACCGTCACC
AGCGCCTCGC AGTTCACCAC GGCGGTGCAG GCGTCAGGAG CGGCCGTCAT CCGGTTCTCC
GGCACGATCA ACCTGTCCAG CATGACCAAG GTCGCGTCCA ACAAGACGAT CCTCGGCGTC
GGCTCCGGCG CCACGATCAC CGGGCAGGGC CTGAACATCG CCAACGCGTC CAACGTGATC
GTGCGCAACG TCAACTTCCG CAACTGGGGT GACGACGCGA TCAACGTGCA GTACTCGACG
CGGGTGTGGC TCGACCACAA CTCGTTCGCC AACGGGTCGG ACGGCGCGCT GGACGTCAAG
CGGGCCTCGG ACTACGTCAC GGTGTCCTGG AACAAGTTCA GCAGCCACGA CAAGACCATG
CTGCTCGGGC ACAGCGACGA CAACGCGTCC GAGGACACCG GCAAGCTGCG CGTGAGCTAC
CACCACAACT GGTTCGACGG CACCAACCAG CGGCACCCCA GGGTGCGGTT CGGCAACCCC
GTGCACGTGT ACAACAACTA CTACGGCGGG GTGACCTCGT ACGGCGTCGC GTCGACCAAG
GACGCGGGCG TCCTGGTCGA GGGCAACTAC TTCGAGAACA CCGAGGACCC GTTCCACCGG
GGTGAGGGCT CGTCGCCCGC GGCCCCGCTG GTGGCGCGGA ACAACCACTT CGTGAACTCG
GGCAGCGGCG ACCAGGGCGG TTCGGTCAAG GCGATCCCCT ACTCGTACGC GCTGGACGCG
GCGAGCTCGG TCAAGTCCGT GGTGACCGGC GGCGCGGGCA CCGGCAAGAT CTGA
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| Protein sequence | MHQKSTRVHW RTGLVAAAVV LAGASVAAPS AGAASFNLEG WATQGGGTTG GGSASPTTVT
SASQFTTAVQ ASGAAVIRFS GTINLSSMTK VASNKTILGV GSGATITGQG LNIANASNVI
VRNVNFRNWG DDAINVQYST RVWLDHNSFA NGSDGALDVK RASDYVTVSW NKFSSHDKTM
LLGHSDDNAS EDTGKLRVSY HHNWFDGTNQ RHPRVRFGNP VHVYNNYYGG VTSYGVASTK
DAGVLVEGNY FENTEDPFHR GEGSSPAAPL VARNNHFVNS GSGDQGGSVK AIPYSYALDA
ASSVKSVVTG GAGTGKI
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