Gene Amir_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1828 
Symbol 
ID8326013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2011077 
End bp2012039 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content73% 
IMG OID644942377 
ProductAcetyl xylan esterase 
Protein accessionYP_003099622 
Protein GI256375962 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3458] Acetyl esterase (deacetylase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTGGT TCGACCTGCC CGAGGCGGAA CTGGCGCAGT ACCGGACCCC CACCCCGGAG 
CCCGCCGGTC TGGACGCCTG GTGGGCCGAG CGCCTCGCCG AGGCCAGGGC GCTGGCGGAG
CCGGTGACGA GCACGCCGCA CGAGGAGTCC GCGTACGGCC CGCTGGGCGT GCGGGACGTG
GAGTTCTCCG GCGCGCTGGG CGACCGCGTG CGCGCCTGGC ACCTGCGCCC GGCAGGCGAC
GACCCGCTGC CCACGGCCGT GGTGTTCATC GGTTACGGCG GCGGAAGGGG AACGCCCACC
GAGCACGCCT GGCTGGCGGC GGCGGGCTAC GGGGTGCTCG TCGTGGACAC CAGGGGCCAG
GGCGGCCGGT GGACCACCGG CGCGACCGCC GACTCGGCCC CGTCGGGCCC GTCGCACCCC
GGTTTCATGA CGCGCGGCAT CACCTCGCCC GAGGGCTACT ACTACACCCG GCTGATGACC
GACGCCGCGC TCGCGGTGGA CGTCGCGGCC GGGCTGGACG GCGTGGACCC CGAGCGGATC
GCGGTGCTGG GCGCCAGCCA GGGCGGCGGC CTGGCGCTGG CGGCGGCGGC GCTGAACCCG
ACGAAGGTCA AGGTGTGCCA CGCGGACGTG CCGTTCCTGT GCGACTTCCA GCGGGCCATC
ACGCTGACCG GCGCGGACCC GTACGCGGAG ATCGCGAACT TCCTGTCGCA CAACGTCGCG
CTGGTGAAGC AGGTGCGGGA GACCCTGACG TACGTGGACG CGGCCCTGCT GTCCAGGCGG
ATCACCGCGA CGAGCCTGCT GAGCGCCGGC CTGATGGACG AGGTCTGCCC ACCGTCAACG
GTGTTCGCCG CCTACAACGA GATCACCGCG CCGAAGCGGA TCGAGGTGTT CCCGTTCAGC
GGCCACGCGG TGCCGAGGAC GCACGACGAG GTGAAGCTGA AGCACCTGCG CGAGCACCTG
TGA
 
Protein sequence
MPWFDLPEAE LAQYRTPTPE PAGLDAWWAE RLAEARALAE PVTSTPHEES AYGPLGVRDV 
EFSGALGDRV RAWHLRPAGD DPLPTAVVFI GYGGGRGTPT EHAWLAAAGY GVLVVDTRGQ
GGRWTTGATA DSAPSGPSHP GFMTRGITSP EGYYYTRLMT DAALAVDVAA GLDGVDPERI
AVLGASQGGG LALAAAALNP TKVKVCHADV PFLCDFQRAI TLTGADPYAE IANFLSHNVA
LVKQVRETLT YVDAALLSRR ITATSLLSAG LMDEVCPPST VFAAYNEITA PKRIEVFPFS
GHAVPRTHDE VKLKHLREHL