| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1822 |
|---|
| Symbol | |
|---|
| ID | 8326007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2003094 |
|---|
| End bp | 2004383 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644942371 |
|---|
| Product | chitin-binding domain 3 protein |
|---|
| Protein accession | YP_003099616 |
|---|
| Protein GI | 256375956 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.309738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGACCCA GGCGATTAGG AGCACTGGCG GCAGCCGTGC TCGCGGTGGT CGGCGTGACC
ACCGTGCTCG GCACCAGTGG AACGGCGCTC GCGCACGGCT CCATGACCTA CCCCGGAAGC
CGCACCTACC ACTGCTACGA GGACGGCCGC GCCAACGGCA ACGGCGACCT CAACCCCGCC
AACCCGGCCT GCGCCGCAGC CGTCGCCCTC GGCGGCAAGC AACCGCTGTG GGACTGGTTC
GGCAACCTCA TCAGCCAGGC GGCGGGCAAG CACCGCGAGA TCATCGCCGA CGGCGACCTG
TGCGGCCCCA CCGCCAAGTA CGACGCCTAC AACCTGCCCC GCGCCGACTG GCCGTCCACG
ACCCTGCGCG CGGGCGCGCC CATCACCTTC CGCTACAACG CCTGGGCCCC GCACCCCGGC
ACCTGGGACC AGTACGTCAC CAAGGACGGC TTCGACGTCA CCAAGCCGCT GAAGTGGTCC
GACCTGGAGC CCGCGCCGTT CGACTCGGTC CTGAACCCGC CGCTCGCGAA CGGCGAGTAC
GCGTGGAACG CGACCCTGCC GAACAAGACC GGCCGCCACG TCATCTACTC GATCTGGCAG
CGCACGGACA GCCCCGAGGC GTTCTACAGC TGCTCCGACG TGGTCTTCAC CGGCGGCAAC
AACACCGGCG ACACCCAGGC GCCCACCGCG CCCGGAACGC CCACGGCCAC CGCGACCAGC
AGCTCGGTCG CCCTGAGCTG GGGCGCGGCC ACCGACAACA CCGGCGTCAC CGGCTACCAG
GTGTACCGCG AGGCGGGCGC CAACGACGCG CTCGTGGCCA CCACGACGAC CCCCTCGGCG
ACCGTCACCG GCCTGACCGC GAGCACCGCG TACCAGTTCT ACGTGGTCGC CCGCGACGCG
GCGGGCAACA CCTCGCCCCC GTCCTCGCCG GTCAGCGTCA CCACCACCGG TGGCGGCGGC
ACGCCCGGCG GGACCTGCGC GGTCACCTAC ACCACACCCA GCGTGTGGTC CGGCGGCTTC
ACCGCGAACG TCGCGGTCAA GAACACCGGG ACCTCGGCGG TCAGCGCCTG GCAGCTGGCC
TGGGACGTGC CCTCGGGCGA GTCGATCACC TCGGCCTGGT CCGCGGAGGT CGTCGTGTCC
GGCGGGAAGG CCACCGCCAA GGGCGTCAGC TGGAACTCCG GCATCGCCCC CGGCGCCACG
GTGAGCTTCG GCTTCAACGG CACGGCAGGC GGCAACCCGG CCAAGCCCGC CGCGTTCACC
CTCGGCGGCG CGACGTGCGC CTCGGCGTGA
|
|---|
| Protein sequence | MRPRRLGALA AAVLAVVGVT TVLGTSGTAL AHGSMTYPGS RTYHCYEDGR ANGNGDLNPA
NPACAAAVAL GGKQPLWDWF GNLISQAAGK HREIIADGDL CGPTAKYDAY NLPRADWPST
TLRAGAPITF RYNAWAPHPG TWDQYVTKDG FDVTKPLKWS DLEPAPFDSV LNPPLANGEY
AWNATLPNKT GRHVIYSIWQ RTDSPEAFYS CSDVVFTGGN NTGDTQAPTA PGTPTATATS
SSVALSWGAA TDNTGVTGYQ VYREAGANDA LVATTTTPSA TVTGLTASTA YQFYVVARDA
AGNTSPPSSP VSVTTTGGGG TPGGTCAVTY TTPSVWSGGF TANVAVKNTG TSAVSAWQLA
WDVPSGESIT SAWSAEVVVS GGKATAKGVS WNSGIAPGAT VSFGFNGTAG GNPAKPAAFT
LGGATCASA
|
|---|
| |