| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1807 |
|---|
| Symbol | |
|---|
| ID | 8325992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1986522 |
|---|
| End bp | 1987730 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644942356 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003099601 |
|---|
| Protein GI | 256375941 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTTC GAGCACTGCT CACGGCGGCG GCGGTGCTCG CCGCCTCCGC TTGCGGGGCA
AATCCCGATG AACCCGAGAA GGTCACCCTG ACCTGGTGGG ACTCCTACGA GTCGGCGACG
GCCGACGAGG CGGCGCAGGC CATGGTGCAG CGCTACCAGG ACGCCCACCC GGAGGTGGAG
GTCAAGCGGA CCTCCATCCC GCGCGCGGAG ATCCGCGCGA AGCTCGACCA GGCCGCGACC
TCCGGGGCGT TCCCGGACGT GGTCGTGGTC GACCAGGCCG ACCTGCCGAG GCTGGCCAAG
CAGAACGCCA TCACCGACCT GACCAAGCTC TTCGAGCAGT GGGAGACCGG GGGGAAGTTC
CTCGGCCCGG TCAGGGCGAG CGTCACCTGG AGCGAGAAGG TCTGGGGCGT CCCGCTGCGC
ACCGAGACCA ACGCCCTGCT GTACAACCGC GACCTGATGC TCGGCGCGCC CCCCACCACC
TGGGAGGGCC TGCGCACCAC GGCCAAGGCG CTGACCAACC CGCAGCGGTC CGGGCTGTGC
TTCGCCGGGC TGCCCGGCGA GGAGCTGACC ACGACGTTCC TTCCGCTGCT GTGGCAGTCC
GGCGGCGACC TGACCGACCT GGACGGCGCG GCCGACGCGC TGGGGTTCCT GCACGACCTG
ATGGCCGCCG ACGGCAGCGT GCCGAACGCG GTGCTCGGCT GGGACGGCGC GCAGGCCGCA
CAGGCGGTGG CGAGCGGGTC CTGCGCGATG GTGATCGGCG GGACATCGTC GGTCAAGCCG
CTGAACTCCT CCGGGATGGC CTGGTCGGTG GCCCCGCTGC CCGCCGGTCC GGCCGGTGAG
GCGGCGGCGC TGTCCGGGGA GACCTGGGTG ATCGGCAAGG GCGCGCGCAG CACCGAGGCC
GCCTGGGACC TGGTGAGGTC GCTGGCCGAC GACAAGGAGA ACGTCACCCA GCTGGGCGCG
GGCCTGGGCG GGCTGCCCAA CCGGTCGGAC ACGGTGGCCG ACCCGGCGTG GCAGTGGGAC
CCGAGCGTGG CCGGGTTCGC CGCGCAGCTG GAGACCGCGC GGCCGAGGGT GGCGTACGGG
TCGAACTACC CGCAGCTGTC CGAGGTGGTG TGGACGATGG TCCAGCGCGT GCTCAAGGGC
GGCGAGGACC CGCAGGTCGC GGCGTCCGAG GCCAAGAAGG CCGCGGCCCC GCTGCTCACC
GACGGGTAG
|
|---|
| Protein sequence | MRFRALLTAA AVLAASACGA NPDEPEKVTL TWWDSYESAT ADEAAQAMVQ RYQDAHPEVE
VKRTSIPRAE IRAKLDQAAT SGAFPDVVVV DQADLPRLAK QNAITDLTKL FEQWETGGKF
LGPVRASVTW SEKVWGVPLR TETNALLYNR DLMLGAPPTT WEGLRTTAKA LTNPQRSGLC
FAGLPGEELT TTFLPLLWQS GGDLTDLDGA ADALGFLHDL MAADGSVPNA VLGWDGAQAA
QAVASGSCAM VIGGTSSVKP LNSSGMAWSV APLPAGPAGE AAALSGETWV IGKGARSTEA
AWDLVRSLAD DKENVTQLGA GLGGLPNRSD TVADPAWQWD PSVAGFAAQL ETARPRVAYG
SNYPQLSEVV WTMVQRVLKG GEDPQVAASE AKKAAAPLLT DG
|
|---|
| |