| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1794 |
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| Symbol | |
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| ID | 8325979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1974385 |
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| End bp | 1975533 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644942343 |
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| Product | ROK family protein |
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| Protein accession | YP_003099588 |
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| Protein GI | 256375928 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00140797 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCAGGC TCAACTCGGC GCTCGTGCTC GACGCGATCG CCTCCGCTCC CGGTTCGTCC
CGCGCTTCCG TGGCGACCAG GACCGGGTTG ACCAAGGCGA CCGTGTCCAG CCTCGTCGAC
CGGATGATCG GCGCGGCCCT GGTGGTCGAG GGGGCGGCCG AGGCGCGGAG CGGGCCCGGT
CGGCGCGGGA CCGCGCTGCA CCTGTCGCCC GCCGGGCCGC ACGGGCTGGG GGTGGAGGTC
GGGGTCGACT ACCTGGCGAC CTGCCTGGTC GACCTGACCG GGCGGGTGCG GAAGCGGTGG
GTGCGGGACA GCGACAACCG GGCGTCCTCG CCCGCGCTGG TGCTGGGCGA GGTGGCCGCC
GCGGTGCGGA TCGCGACCAG GGAGGACGTG CCGGTCGGCG GGATCGGGGT GGCGGTGCCG
GGGCTGGTCG AGTCGGCCAG CGGCGTGCTG CGGGTCGCGC CGAACCTGGG GTGGCGCGAG
GTGGACGTGC GCGGCGAGCT GGGGCGGTTG CTCGGGGCCG ACGCGGGCGG GCTGCCGGTG
CAGGTCGGCA ACGAGGCGAA CCTCGCCGCG CTCGCCGAGC TGTGGCACGG CGACGCGCCG
CAGGACTTCG TGCACGTGTC CGGCGAGATC GGCATCGGCG CGGGCATCGT CGTGGACGCG
GGCCTGTTCG AGGGCGTGTC CGGTTTCGGC GGCGAGATCG GCCACCTGTC CGTGGACCCG
AGCGGTCCGC GCTGCACGTG CGGCTCGCGC GGCTGCCTGG AACGGCTGGC CGGGCAGGAC
GAGATCCTGC GCGCGGCGGG CGCGGCCGAC GTGGCGGACC TGCTCGCCAG GCTCGACGCG
GACGACCGGG AGGCGGTCGC GGCGGTGCGG ACGGCGGCCA GGTGGCTGGG CATCGCCCTG
TCGGGCGCGG TGAACCTGCT CGGTCTGCCC GCGGTGGTGC TGGGCGGCGC GTACGCGCGC
CTGGAACCGT GGCTGCGCCC CACCCTGGAG GCGGAACTGG GCGGACGCGT GGTGAGCGCG
GCCTGGTCCC CGGTGGCGGT GACGGCGTCC TCGCTGGGCG ACGAGGCGGC GGTGCGAGGC
GCGGCGACCA GCGCGGTCCG CGCGATCCTG GCCGACCCCG AGCCGTACGT GGCCTCGGTC
CTGGCCTGA
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| Protein sequence | MRRLNSALVL DAIASAPGSS RASVATRTGL TKATVSSLVD RMIGAALVVE GAAEARSGPG
RRGTALHLSP AGPHGLGVEV GVDYLATCLV DLTGRVRKRW VRDSDNRASS PALVLGEVAA
AVRIATREDV PVGGIGVAVP GLVESASGVL RVAPNLGWRE VDVRGELGRL LGADAGGLPV
QVGNEANLAA LAELWHGDAP QDFVHVSGEI GIGAGIVVDA GLFEGVSGFG GEIGHLSVDP
SGPRCTCGSR GCLERLAGQD EILRAAGAAD VADLLARLDA DDREAVAAVR TAARWLGIAL
SGAVNLLGLP AVVLGGAYAR LEPWLRPTLE AELGGRVVSA AWSPVAVTAS SLGDEAAVRG
AATSAVRAIL ADPEPYVASV LA
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