Gene Amir_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1761 
Symbol 
ID8325946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1932807 
End bp1934399 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content78% 
IMG OID644942310 
Productamine oxidase 
Protein accessionYP_003099555 
Protein GI256375895 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0378062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGGTT CAGCGGGTGA CGAGGTGGAC GTGGTGGTCG TCGGGGCCGG GCCCAACGGG 
CTGGTCGCCG CCGCGCTGCT GGCCGACGCG GGCTGGGACG TGGCCGTCCT GGAGGCCGGG
GACCGGCCGG GCGGGGCGGT GCGGACCGAG GAGTTCGTGG CTCCCGGCTT CCGCAGCGAC
GTGTTCAGCT CGTTCTACCC GCTGGGCGCC GGGTCGCCGG TGATCGCGGG GCTGGGGCTG
GAGGAGCACG GGCTGCGGTG GCGGCGGGCG CCCGAGGTGC TGGCGCACGT GCTGCCGGAC
GACCGGGTCG CGGTGCTGTC GGACGAGGTG GAGCGCACGG CCGCGTCGCT GGAGGCGTTC
GGCGCGGGCG ACGGGCAGGC GTGGCGGGAC GAGTTCGCGC TGTGGGAGCG GGTGCGCGAG
CACCTGCTGG ACGCGCTGCT GCGGCCGTTC CCCCCGGTCC GGGCGGGCGC GGGGCTGCTG
GGCGCGCTGG GGGCCGGTGA CGCGCTGCGG CTGCTCCGGT CGCTGGTGCT GTCGGTGCGG
GCGTTCGGGG CCGAGCGGTT CACCGGCGAG GGCGGCACGC TGCTGCTCGC GGGCAACGCG
ATGCACACCG ACCTCGGGCC CGACCAGGCG GCGGGCACGG CGTTCGGGTG GCTGCTGTCG
ATGCTCGGGC AGGACGTGGG CTACCCGGTG CCGGAGGGCG GCGCTGGGGC GCTGGCGGAG
GCGCTGACGC GGCGGTTCGG CGGGGCGGTG CACCTGGGGC GGCCGGTGGA CCGGATCGTC
GTCGCGGGCG GCCGGGCGCT GGGTGTGCGG GACGCGGCGG GCGGGTTCGT GCGGGCGCGC
AAGGCCGTGC TGGCGGACGT CCCGGCGCCC GCGCTGTACC TGGACCTGGT CGGGGCCGAG
CACCTGCCCG CGCGGCTGGT GTCGGACCTG GCGGCGTTCG AGTGGGACGA CGCGACGATC
AAGGTGGACT GGGCGCTGTC CGGGCCGATC CCGTGGACCG CCGAGGCCGC GCGCCGGGCC
GGGACCGTGC ACGTCGGCGG CGACCTGGAC GGGCTGGCGG TGGGCGCGAC GCAGATCGCC
TGCGGCCGGG TGCCCGACGA CCCGTTCCTG ATCATGGGCC AGATGACGAC GGCCGACCCG
ACCCGCTCCC CCGAGGGCAC CGAGGCCGCG TGGGCCTACA CGCACGTGCC GCGCGGGCCG
AGGTGGACGC GCGACGAGCT GGAGCGGTAC GCGGACCGGG TCGAGGCGGT CGTGGAGGCG
CGCGCGCCGG GGTTCCGGGA CCTGGTGCTG GGGCGGGTCG TGCAGGGGCC CGAGGATCTG
CAGGACCGCA ACCCGAGCCT GCTGGGCGGG TCGACCAACT CCGGGACGGC GGCGATCCAC
CAGCAGCTGG TGTTCCGGCC GGTGCCGGGG CTGGGGCGGG CGGACACGCC GGTCGACCGG
CTGTACCTGG CGAGCGCGTC GGCGCACCCC GGCGGCGGGG TGCACGGGGC GGCGGGCGCG
AACGCGGCGC GGGCCGCGCT GGCGCGCAAC GGGCTGGGCG GCGACGGGTA CCGGCTGCTG
GTGCAGGGGT TGCAGCGGGC GCTGCACCGG TAG
 
Protein sequence
MLGSAGDEVD VVVVGAGPNG LVAAALLADA GWDVAVLEAG DRPGGAVRTE EFVAPGFRSD 
VFSSFYPLGA GSPVIAGLGL EEHGLRWRRA PEVLAHVLPD DRVAVLSDEV ERTAASLEAF
GAGDGQAWRD EFALWERVRE HLLDALLRPF PPVRAGAGLL GALGAGDALR LLRSLVLSVR
AFGAERFTGE GGTLLLAGNA MHTDLGPDQA AGTAFGWLLS MLGQDVGYPV PEGGAGALAE
ALTRRFGGAV HLGRPVDRIV VAGGRALGVR DAAGGFVRAR KAVLADVPAP ALYLDLVGAE
HLPARLVSDL AAFEWDDATI KVDWALSGPI PWTAEAARRA GTVHVGGDLD GLAVGATQIA
CGRVPDDPFL IMGQMTTADP TRSPEGTEAA WAYTHVPRGP RWTRDELERY ADRVEAVVEA
RAPGFRDLVL GRVVQGPEDL QDRNPSLLGG STNSGTAAIH QQLVFRPVPG LGRADTPVDR
LYLASASAHP GGGVHGAAGA NAARAALARN GLGGDGYRLL VQGLQRALHR