Gene Amir_1758 details

Gene Information

• Locus tag: Amir_1758
• ID: 8325943
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1930861
• End bp: 1931406
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644942307
• Product: transcriptional regulator, LuxR family
• Protein accession: YP_003099552
• Protein GI: 256375892
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGATCA GTCCAGTGGC TTTCGCAGTG GAGTTGACTT TTCGCGACGC GCGACAGGTG 
CGCAGATCGA TTCACCTCGC GCACCGCGAA TACTGGCGAC CGCTCGCCGA GCAGGGCGTG 
CTGGTCGGCA CCGGGCCGTG GGCCGACGGC AGCGGAGTGC TGCTCGTCTG CCAGGTGCCG 
GACGAGGCGG CGGCGCGCGA CCTGGTGCGC GGCGACCCCT ACGTGCGGTC CCAGTCGGTG 
GCCGAGGTGC GGATCAGGCA GTGGCACGTG CTGCTCGGCC TGCCCGACCA CGAGCGGGTC 
CCGTCCGTGG TCCGACCTCG CGACGGCCAG AGCGCCGATC GCTCGAAGGA GCCGCTCACG 
CCGCACGAGC ACCGCATCGC GCTGATGATG CTGGAGGGCA TGACCAACCG GCAGATCGCC 
GAGCACTTCT CGGTGTCCAC CCGCGCGGTC GAGCTCCACA TCACCCGGAT CTACCGCAAG 
CTCGACATCG GTCGACGGGC GCAGCTCGCC GCGGCCATGC CGTGGGGTCA GCGTTCCTAC 
CTGTAG 

 

Protein sequence

MGISPVAFAV ELTFRDARQV RRSIHLAHRE YWRPLAEQGV LVGTGPWADG SGVLLVCQVP 
DEAAARDLVR GDPYVRSQSV AEVRIRQWHV LLGLPDHERV PSVVRPRDGQ SADRSKEPLT 
PHEHRIALMM LEGMTNRQIA EHFSVSTRAV ELHITRIYRK LDIGRRAQLA AAMPWGQRSY 
L