Gene Amir_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1685 
Symbol 
ID8325870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1842769 
End bp1843434 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content76% 
IMG OID644942235 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003099480 
Protein GI256375820 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.614015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCTGA CCGCGGGCAT GGCCACCGAC GTCGGCCGGG TGCGCCACGA CAACGAGGAC 
TGCGCGCTGG TCGGCGCGCA CGTGTTCGCC GTCGCCGACG GCATGGGCGG GCACGCGGCG 
GGCGAGGTGG CCAGCGCGCT CGCCGTCGCC GCGCTCCGCG ACCTCGACGC CACCCCCGCC 
CGCCGCGTCG GCGACGTGCA GCGCGCGCTG GAGGAGGCCA ACGACGCGAT GCTCGCCGAG 
GGCGCCACCG ACCCCGGCAA GCGCGGCATG GGCACCACCG CCACCGGCAT CGCCATGGTC 
GACGTGCTCG GCCAGGCGCA CTGGGCGGTG TTCAACATCG GCGACTCGCG GGTGTACCGG 
CTGTTCGACG GCGACCTCGC CCGCCTCACC ACCGACCACT CGCGCGGCCA CGTCCTCACC 
CGCTCGCTCG GCGTCGACCG CATCCCCACC CCCGACCTGC TGGTCATGCC GCCTGCCGCG 
GGCGAGCGGT TCCTGATGTG CTCGGACGGG CTCACCGACG AGCTGGACGA CGCCGAGATC 
GCGCACGTGC TGTCCCGGAT CGCCGAACCG GGCGTGGCCG CCGACGAGCT GGTGCGCCGC 
GCCGTCGAGG CCGGTGGTCG GGACAACGCG ACGGCCGTGG TCGTGGACGT GGCGGTGCCC 
CGGTGA
 
Protein sequence
MQLTAGMATD VGRVRHDNED CALVGAHVFA VADGMGGHAA GEVASALAVA ALRDLDATPA 
RRVGDVQRAL EEANDAMLAE GATDPGKRGM GTTATGIAMV DVLGQAHWAV FNIGDSRVYR 
LFDGDLARLT TDHSRGHVLT RSLGVDRIPT PDLLVMPPAA GERFLMCSDG LTDELDDAEI 
AHVLSRIAEP GVAADELVRR AVEAGGRDNA TAVVVDVAVP R