| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1678 |
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| Symbol | |
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| ID | 8325863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1833856 |
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| End bp | 1835517 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644942228 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003099473 |
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| Protein GI | 256375813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.495361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTCA GGCGAACGGC CGCCCTCGCC CTCGCGGCGA TCACGGCCTT CACCCCGCTC
GCCGCCTGCT CCACGAGCAA CCAGGGCGCG CAGTCCCAGG CCGGTGTGCT GAACGTGGGC
AAGCCGGACG GCCCGCAGAC CGAGAACCAC AACCCGTTCC TCAACTCGTC CGCCGCGACG
ATCATGGGCT ACCGCAGGCT GATCTTCGAG CCGCTGACCA TGGTCAACGA GACCGACGCG
ACCCAGGAGC CCACGCCCTG GCTGGCCAGC GAGTGGGACT GGCAGGAGAA CTACTCCAAG
CTCGTGCTGA CCGTGCGCGA GAACGTCACC TGGTCCGACG GCAAGCCGCT CACCCCGGCC
GACGTCGCGT ACACGTTCAC CTTGCTGAAG AACAACCCCG GCCTGAACAT CCAGGGCCTG
CCGATCGACG GCGCGAGCGT CGACGGCGGC AAGGTGACGG TGAGCTTCCC GCGCTCCCAG
TTCACCAACC GCAACAAGCT CCTGGAGCAG TTCGTCGTCC CCGAGCACAT CTGGTCGACC
TACGCGAACC CGTCAACGGA GACGGTCAAG AACCCGGTCG GCAGCGGCCC GTACACGCTG
AAGTCCTTCA CCCCGCAGAC CCAGACCCTC GTCGCGCGCG ACAGCTACTG GCAGGAGCTG
CCGCAGGTCA AGGAGGTCCG GTACACCGCG TACGCCGACA ACAACGCGCA GACCACCGCG
CTGGCCAACG GCACCACCGA CTGGAGCTTC GTGTTCATCC CGAACTACGA GGCCGTCTAC
ACCAGCAAGG ACCCGCAGCA CAACAAGCTC TGGTTCCCGC CGGTGCTGGG CATCCACGGC
CTGTGGTTCA ACACCAAGAG CGCCCCGTGG GACAACCCGG CGCTGCGCCG CGCGGTGAAC
CAGGTGGTCA ACCGGCAGGA CATCTTCGTG CAGGGCGAGG GCGGCTACTT CTACCCGAAG
GTCGACAACA TCACCGGCAT CCCCACGCCC GCCGGTGACC CGTTCATCGC CGACGAGTTC
AAGGGCAGGA CCGTCGAGGT GGACGTCGCC GCGGCCAAGA AGGAGCTGAC CGACAACGGC
TTCAGCTACG ACGGCGACAA GCTCAAGGAC CCGTCCGGCA AGCCCGTGAC GCTGAAGATG
ACCGTGCCGT CCGGCTGGTC CGACTACGTC ACCAACGTCG AGATCATCAA GGACAACGTC
TCCGACATCG GCGTCGAGGC CACCGTCGAG CTGCAGAACG TCGACGCCTG GACCAAGGCG
CTGGACACCG GCGACTTCCA GGCCGCGCTG CACTGGACCA ACAACGGTCC CACGCCGTAC
GACATCTACC AGTCCATCAT GGACGGCGCG CTCTACAAGC CGGTCGGCCA GGGCGGCATC
AACGGCAACT ACGGGCGCTA CGAGAACCCC GAGGCCACCG CCGCGCTGGA GCAGTACGCC
ACCGCGCCCG ACGAGGCCTC CCGCACCGCC GCGATGACCC TGCTCCAGCA GATCTTCGTG
CGCGACATGC CGGTGGTCAT CACCTCGGCG GCCAACGGCG GCGGCGAGTA CACCACCCGC
AACTGGACCG GCTGGCCCGA CGCCGAGAAC CCCTACGCGC CCGCCCAGAT GACCCTGGAG
AACGCGCTGC AGATCGTCCT CAAGCTGAAG CCCGCCGCAT GA
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| Protein sequence | MRLRRTAALA LAAITAFTPL AACSTSNQGA QSQAGVLNVG KPDGPQTENH NPFLNSSAAT
IMGYRRLIFE PLTMVNETDA TQEPTPWLAS EWDWQENYSK LVLTVRENVT WSDGKPLTPA
DVAYTFTLLK NNPGLNIQGL PIDGASVDGG KVTVSFPRSQ FTNRNKLLEQ FVVPEHIWST
YANPSTETVK NPVGSGPYTL KSFTPQTQTL VARDSYWQEL PQVKEVRYTA YADNNAQTTA
LANGTTDWSF VFIPNYEAVY TSKDPQHNKL WFPPVLGIHG LWFNTKSAPW DNPALRRAVN
QVVNRQDIFV QGEGGYFYPK VDNITGIPTP AGDPFIADEF KGRTVEVDVA AAKKELTDNG
FSYDGDKLKD PSGKPVTLKM TVPSGWSDYV TNVEIIKDNV SDIGVEATVE LQNVDAWTKA
LDTGDFQAAL HWTNNGPTPY DIYQSIMDGA LYKPVGQGGI NGNYGRYENP EATAALEQYA
TAPDEASRTA AMTLLQQIFV RDMPVVITSA ANGGGEYTTR NWTGWPDAEN PYAPAQMTLE
NALQIVLKLK PAA
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