| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1523 |
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| Symbol | |
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| ID | 8325703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1680165 |
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| End bp | 1681400 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644942070 |
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| Product | deoxyribonuclease/rho motif-related TRAM |
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| Protein accession | YP_003099320 |
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| Protein GI | 256375660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCA CAACCTGGCT GAAGCAGGTA GTCGAGGTCG AGGTCGGGGC GGTCGCCCAC
GGCGGCCACT GCGTGGCCCG GCACGAGGGT CGGGTGATCT TCGTCCGGCA CGCGCTGCCC
GGCGAGCTCG TCCGCGTCCT GATCACCTCC GACAACGGAG GCTCGTTCTG CCGCGGCGAC
GCCGTCGAGG TCCTGCGGTC CAGCCCGGAC CGGGTCACCC CGCCGTGCCC GTTCTCCGGA
CCGGGCATGT GCGGCGGCTG CGACTGGCAG CACGCCTCCT GGGGCGCCCA GCGCGACCTC
AAGGCCGCCG TCGTCGCCGA GCAGCTCCAG CGCCTCGCGG GCGTGGAGCG CGAGGTGGTG
GTCGAGCCGC TGCCCGGCGG CCACCGCGAC TGGCGCACCC GGCTGCGGCT CGCCGTCGGC
CGCGACGGCA AGCCCGGCTT CCGGGGCCAC CACAGCCACG ACGTGATCCC GGTCGACCAC
TGCGTGATCG CCGCGCCCCA CGCGCTGGAC GACGTGCTCG ACCGCGCCTG GCGGCCCGGC
TCCGAGCTGG CCGTCACGCT CGACTCCACC GGCAAGCAGC ACGTCACCGA GATCGCCCCC
GCCCAGCGCA GGGGCGGCAG GCGGCCGACG CCCGGCCCGT CCAAGCTGCG CAGGGGCAGC
GGCGGCGCCG TCGAGCGCGC CGCGGACCGC GACTGGCTGG TGCGCGCCGA CGGCTTCTGG
CAGGTCCACC CGCACGCGGC CGACACGTTC GCCCGCGTCG TCGGCGAGTG GGCCGCCTGC
GAGCCCGGCG ACCACGCCTG GGACCTGTAC GGCGGCGCGG GCCTGTTCGC GTCCGTCCTG
GCCGCCCAGG TCGGCGAGAC CGGTTCCGTC GAGGTGGTCG AGTCCGCCAC GAACGCCGTC
CGCGACGGGC AGCGCGCCCT CGCCGACCTG CCGCAGGTGA AGTGGCACGT GGGCCGGGTG
GAGGACTCCG TCACCCGCGC GCCGTTCACC GACCGGTCAC CCTCCGTCGT CGTCCTCGAC
CCGCCCCGCA AGGGCGCGGG CGCCGCGGTC CTCGACGCCG TCGCCGCGCG CCGCCCCGCC
AGGGTGGTGT ACGTCGCCTG CGACCCCGCG GCCCTGGCCA GGGACGTCGC CCTGCTCGCC
GGTCACGGCT ACCGGTTGGC CCAGCTCAGG GCGTTCGACG CGTTCCCGAT GACGCACCAC
GTCGAGTGCG TCGCCCTGTT CACGCGCGGT GACTGA
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| Protein sequence | MSTTTWLKQV VEVEVGAVAH GGHCVARHEG RVIFVRHALP GELVRVLITS DNGGSFCRGD
AVEVLRSSPD RVTPPCPFSG PGMCGGCDWQ HASWGAQRDL KAAVVAEQLQ RLAGVEREVV
VEPLPGGHRD WRTRLRLAVG RDGKPGFRGH HSHDVIPVDH CVIAAPHALD DVLDRAWRPG
SELAVTLDST GKQHVTEIAP AQRRGGRRPT PGPSKLRRGS GGAVERAADR DWLVRADGFW
QVHPHAADTF ARVVGEWAAC EPGDHAWDLY GGAGLFASVL AAQVGETGSV EVVESATNAV
RDGQRALADL PQVKWHVGRV EDSVTRAPFT DRSPSVVVLD PPRKGAGAAV LDAVAARRPA
RVVYVACDPA ALARDVALLA GHGYRLAQLR AFDAFPMTHH VECVALFTRG D
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