Gene Amir_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1411 
Symbol 
ID8325591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1557326 
End bp1557964 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content73% 
IMG OID644941959 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003099209 
Protein GI256375549 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.732833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATA TTGGCCGCGC CCTCTACCGG GACCAGGCGT TGTCGGCGAT CCGTGAGGCG 
ATCATGGTCG GCGATCTGGC CCCCGGCGCG CCGATCCGCG ACGTCGAGCT GGCCGAACGG 
CTCGGGTTGT CGCGGACTCC GGTGCGGGAG GCGTTGGCGC GGTTGACCGA CGAGGGCCTG 
GTCGAGTCGA AGCCGCACAG CTACACGCGG GTCACCGAGC TGAGCACGTC GGCGGTCCGG 
GACGCGCACG CCGTCGTCCA GGCGATGCAC GCCCTCGCGG CCCGCTTGGC CGTCCCGCTC 
ATGGACGCGG GTGATCTCGA CGCGATGCGC TCGGCGAACG CGCGGTTCGC GTCGGCGCTG 
GTCGACCGGG ACGTGGCCGC CGCGCTGGCG GCCGACGACG AGTTCCACGA CGTCGCGGTG 
CGGCGCAGCG GCAACTTCGC CGTCGTCGCC ACGATCGAGC GCTACACCCC GCTGGTGCGC 
CGCCTGGAGC GGCTGCGGTT CGGCACCCCG CCCGGTCGTC ACTCCGTGGC GATGCACGAC 
GAGATCATCG CCGCCTGCGC GGCCCCGGAC GCCGACCTCG CCGCCGTGCT GGTCGAGCGC 
AACTGGGCCA CGCTGGCGGA CCTGCTTGAG GAGGACTGA
 
Protein sequence
MQYIGRALYR DQALSAIREA IMVGDLAPGA PIRDVELAER LGLSRTPVRE ALARLTDEGL 
VESKPHSYTR VTELSTSAVR DAHAVVQAMH ALAARLAVPL MDAGDLDAMR SANARFASAL 
VDRDVAAALA ADDEFHDVAV RRSGNFAVVA TIERYTPLVR RLERLRFGTP PGRHSVAMHD 
EIIAACAAPD ADLAAVLVER NWATLADLLE ED