| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1312 |
|---|
| Symbol | |
|---|
| ID | 8325491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1449434 |
|---|
| End bp | 1450459 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644941859 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_003099110 |
|---|
| Protein GI | 256375450 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0502064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCATG ACCCGGTGTC CGTGCTCGGC ATGGGTGCGA TGGGGCTCCC CATCGCCCGG
AACCTCGCGC GCGCCGGCTT CCCGGTCACG GTCTGGAACC GCACGCCCGG CAAGGACGGC
TCCGCGCGGG CGCTCGGCGC CACCTCGGCC GCCACGCCCG CCGACGCCGC CCTGCCCGTC
GTGCTCACGG TGCTGCCCGA CCTGCCGCAG GTGCGCGAGG TGCTGCACGG CGGCCCGCCC
GGTCGGACCG GCATCCCGCA GCAGTCGGGC GGCGCGGACC CGGAGCACGA GCTGAACGGC
AACGGCGCGG GCCCCTCGGC GAGCCCGTGG CCCGCCACCT CCGGCGCCGG GCTGCTCGAC
GGCTGGCGGC GCGCCGGGAC CACCGACCCG CTGCTGGTCG TCATGGGCAC GGTGTCCCCC
GGCGGGGTGC GCGAGCTGGG CGCGGAGCTG GCCCCGCTCG GCGTGCGGGT GGTCGACGCG
CCGGTGTCGG GCGGCGACGT CGGCGCCGAG GCGGGCACCC TGAGCGTCAT GGTCGGCGGC
CAGGCCGACG ACGTGCTGCG GCTGCGCCCC TACCTGACCG CGCTCGGCAC CACCGTCCGC
CACATGGGCC CGCTCGGCGC GGGCCAGCTC ACCAAGGCGG GCAACCAGGT CGTCGTGGCC
GCCACGCTCG CCGCGATCTC CGAGGCCCTC GCCCTGACCA GCAAGAACGG CCTCGACCCC
GAGCTGGTGC TGGAAGCGCT CTCCGGCGGT CTCGCGGGCG GGCGGGCGCT GGAGGTCAAG
CGGGAGAAGT GGCTGACCGG CGACTACACC CCCGGCGGTT CGGCGGCGAA CCAGCTCAAG
GACCTCGGGT TCGCCATGGA GACCGCCCGC GCGTCCGGGG TGCCGCTGCC GGTCACCGCG
ACCGTCGCCC AGCTGTACAC CGCGATGTGC GCGCTCGGCC TCGACCAGGC CGACCACAGC
GGCGTCTACC AGGTGTACGA GCACCTCAGC GGCCTGCCCA GCTGGAGCAC CCACCACGGC
CGGTGA
|
|---|
| Protein sequence | MRHDPVSVLG MGAMGLPIAR NLARAGFPVT VWNRTPGKDG SARALGATSA ATPADAALPV
VLTVLPDLPQ VREVLHGGPP GRTGIPQQSG GADPEHELNG NGAGPSASPW PATSGAGLLD
GWRRAGTTDP LLVVMGTVSP GGVRELGAEL APLGVRVVDA PVSGGDVGAE AGTLSVMVGG
QADDVLRLRP YLTALGTTVR HMGPLGAGQL TKAGNQVVVA ATLAAISEAL ALTSKNGLDP
ELVLEALSGG LAGGRALEVK REKWLTGDYT PGGSAANQLK DLGFAMETAR ASGVPLPVTA
TVAQLYTAMC ALGLDQADHS GVYQVYEHLS GLPSWSTHHG R
|
|---|
| |