Gene Amir_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1280 
Symbol 
ID8325457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1418628 
End bp1419329 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID644941825 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003099078 
Protein GI256375418 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGATCG GGTACCGAGA GCTCGCGGCC GTGCTGCGGG AAGCGATCCG ATGTGGCGAC 
TACCCGCAGG GGACGACGCT GCCCAAGCAG GAGGACTTGG CCGCCGAGTA CGGGATCAAC 
ATCAACACTG TCCGGAAAAC GGTCGCGACA CTGGAGGCTG AAGGGCTGGT GACCTCCGTA 
CGCCGTCGCG GCACGGTGGT GAGGCCCCAG CCGGTCATGA AGCGCTTGGA CGTCGAGCGG 
TACGCCAAGA GCCAATGGAA GTTCGATGAC CTGACCGACG AGGTCCGCCA GGTCGAGGCG 
GACGCCGAGA CCGCCGAGGC CCTGGGGCTG GAGACCGGCG CCACCGTCTA CGAGCGCGCA 
CGGCTGGTCC GGGACGGCGA GACGCCCACG CACACACTGA CGAGCTACTA CAACCCGGTG 
CACGTCGAGG GGACGCCGCT GGTCAGCCCG AAGCCGGGGC CCGGTGGCGG GTTCGCCGTG 
TTGACGTTGC AGGGCTTCGA GCCCGACCAC ATGACCGAGA GCGTGCACTC CCGGATGCCC 
AGGCCCGAGG AGGTCGAGGA GCTGGAGCTG CCCGCCGGTG AGCCCGTGAT GATCCTGACG 
CGGCGGACCT TCACCAAGGA CAGGACGCCG ATCGAGTTTG CGCGGGGTGT GCACGCGGCT 
AGTCGGTTCG TGTGGTCCTA CAGCTTCCAG ATCCCCGAGT AG
 
Protein sequence
MPIGYRELAA VLREAIRCGD YPQGTTLPKQ EDLAAEYGIN INTVRKTVAT LEAEGLVTSV 
RRRGTVVRPQ PVMKRLDVER YAKSQWKFDD LTDEVRQVEA DAETAEALGL ETGATVYERA 
RLVRDGETPT HTLTSYYNPV HVEGTPLVSP KPGPGGGFAV LTLQGFEPDH MTESVHSRMP 
RPEEVEELEL PAGEPVMILT RRTFTKDRTP IEFARGVHAA SRFVWSYSFQ IPE