Gene Amir_1273 details

Gene Information

• Locus tag: Amir_1273
• ID: 8325450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1411882
• End bp: 1412607
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644941818
• Product: peptidase S51 dipeptidase E
• Protein accession: YP_003099071
• Protein GI: 256375411
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3340] Peptidase E

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.477394
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGCGG AGCAACCGAC GATCCTCGCC ACCTCGGGTG GCTTCCGCGC CGGGCGGCGC 
ACGTCGCTGG AGTTCGGCGA CCTGGTGCGG TTCGCCGTCG AGCTGTCCGG CGCGACCGGG 
CGGCCCCGGC TGCTGCACGT GGGCACCGCC AACGGGGACC AGCGGTTCTT CAACGCGCAC 
CTGAGCGAGG CCGGGCAGCT CGCCGGGTGG GACGTGGCGC ACCTGAACCT GTTCACCATG 
CCGCCGGTGG ACGACGTCGC CTCGTTCGTG CTGGAGCACG ACGTGGTGTG GGTCGGCGGC 
GGGTCGGTGG CGAACCTGCT CGCGGTGTGG CGGGTGCACG GGCTCGGCCC GGTGCTCCGG 
CGCGCCTGGG AGGCCGGGGT GGTGCTCGGC GGGGTGTCGG CGGGGGCGAT CTGCTGGTAC 
GAGGGCGGGG TGACCGACTC GTTCGGGCCG CAGTTGCGCG TGGTGCGCGA CGGGCTCGGG 
TTCCTGCCGT ACGGCAGCGG GGTGCACCTG GACTCGGAGC CCGCGCGGCG GCCCGCCGTG 
CACGCGGCGG TCGGCGGCGG CGAGCTGCCG GTCACGCACT GCACGGACGA CGGGGCCGGG 
TTGCTCTACC GGGGGGTGGA GCTGGTGGAG GCGGTCGCCG AGCGCGACGG CGCCGGGGCG 
TGCGTGGTGC GGCCCGACGG GAGCGGCGGG GTGGTGGAGG AGGCGCTGGA CGTGCGGCGG 
CTGTGA 

 

Protein sequence

MPAEQPTILA TSGGFRAGRR TSLEFGDLVR FAVELSGATG RPRLLHVGTA NGDQRFFNAH 
LSEAGQLAGW DVAHLNLFTM PPVDDVASFV LEHDVVWVGG GSVANLLAVW RVHGLGPVLR 
RAWEAGVVLG GVSAGAICWY EGGVTDSFGP QLRVVRDGLG FLPYGSGVHL DSEPARRPAV 
HAAVGGGELP VTHCTDDGAG LLYRGVELVE AVAERDGAGA CVVRPDGSGG VVEEALDVRR 
L