Gene Amir_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1272 
Symbol 
ID8325449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1411087 
End bp1411725 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID644941817 
Productprotein of unknown function DUF218 
Protein accessionYP_003099070 
Protein GI256375410 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGC TGGCCAGGCT CCGCCGCTAC GTCCAGAGAA CCCTGCTGGG CGGCATCGCG 
ATCGTCCTGA TCGTCACAGG GGGCACGACG TTCCGGGTCT GGCAGGTGGC CAGGGACGAC 
GACCGCACGC ACGCGGACAT GGCGGTGGTC CTGGGCGCCG CGCAGTACAA CGGGGTCCCC 
TCGGACGTCC TGGCCGCCCG GCTGGAGCAC GCGCGCAGGC TCTACGAGCA GGACGTGGTG 
GACTACATCG TCACCACCGG CGGCCGTCAG CCCGGCGACA ACTTCACCGA GGGCGAGGCG 
GGCCGGATCT GGTTGGAGGA GCGCGGGGTG CCCGCCGACC GGGTGATCGA GATCGGCGAG 
GGCACCGACA CGCTGGGCAG CATCAAGGCC GTCGCGGTGC GGGCGCACGA GCGCTCGCTG 
CGGACCGCGG TGATCGTCAG CGACCCGTGG CACTCGCTGC GGGCCCGCAC CATGGCCGAG 
GACCAGGGCC TGGACGCGTG GACGTCGCCG ACGCGCAGCG GCCCGAACGT GCAGACCCGC 
GAGATGCAGC TCTACTACAT CCGCCGCGAG ACCATGGCGC TGATGTACTA CCACCTGCTC 
AAGGCCCCGG TGGACGCCGT GGACGACATC CCGATCTAG
 
Protein sequence
MTLLARLRRY VQRTLLGGIA IVLIVTGGTT FRVWQVARDD DRTHADMAVV LGAAQYNGVP 
SDVLAARLEH ARRLYEQDVV DYIVTTGGRQ PGDNFTEGEA GRIWLEERGV PADRVIEIGE 
GTDTLGSIKA VAVRAHERSL RTAVIVSDPW HSLRARTMAE DQGLDAWTSP TRSGPNVQTR 
EMQLYYIRRE TMALMYYHLL KAPVDAVDDI PI